Hello FS experts,
I am reposting as a good few emails went by after me posting. My question is below.
Thank you for your help.
Pablo


From: pablonajt@hotmail.com
To: freesurfer@nmr.mgh.harvard.edu
Date: Tue, 6 Oct 2015 13:53:21 +0000
Subject: [Freesurfer] repeated measures ANOVA using the FSGD file

Dear FS experts
Trying to set up a Linear Mixed Effects, which I understand would basically be a repeated measures design. My design has 3 groups (HC, PT relatives and PT).
Instead of time points  of the same subject my design matrix uses each family member within a family. So I will have many subjects within family_1, same for family_2 and so on...    I also want to include gender as a covariate
In short my question is:
For my design in repeated measures do I need to define all my groups for each discrete variable as how we do it for glm?
For example if I want to have variables GROUP + GENDER + FAMILY.
Should i do it as follows?
class HC_Female_Family1
class PT_Female_Family1
class HC_Male_Family2
class HC_Female_Family2
...
...

Many thanks,
Pablo

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