Hi everyone,

I was wondering if someone could please address the following question regarding FreeSurfer usage.

I would really appreciate any help.

Thanks.

Hi,

I used following command to extract LGI values from a set of subjects:

recon-all -s <subj> -localGI

Output stats is saved in lh.aparc_lgi.stats file. By default, its calculating LGI values of 35 areas using Desikan-Killiany Atlas but I am interested in calculating LGI values using Yeo atlas of 7 networks. I was wondering how can I change the default atlas to Yeo atlas to get LGI value for each subject.

Thanks a lot.