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Dear Eugenio,

 

Thanks so much for your update. I downloaded MATLAB 2019b and carried out the symlink to MCRv84 in the freesurfer folder but unfortunately I get the same error as last time when I run the Hip segmentation command. Is there something I need to differently? The error still tells me to download the 2014b compiler.

 

Best,

Ashwati

 

-- 

Ashwati Vipin (PhD)

Research Fellow - Dementia Research Centre

Lee Kong Chian School of Medicine

Nanyang Technological University, Singapore

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From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> on behalf of Iglesias Gonzalez, Juan E. <JIGLESIASGONZALEZ@MGH.HARVARD.EDU>
Date: Friday, 8 April 2022 at 11:27 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: [Freesurfer] [IMPORTANT MESSAGE] Subfields & MCR problems solved

Dear all,

 

We have recently fixed two problems in the subfield modules using the Matlab runtime:

 

1. We have moved on from MatlabR2014b to MatlabR2019b, which enables users to run the code in more modern versions of Mac OS.

 

2. A bug in the the longitudinal hippocampal subfield (& amygdala) segmentation was fixed, where the volumes reported in the text files did NOT account for linear deformations across timepoints, thus greatly underestimating change (I would *really* like to apologize for this). 

 

Kind regards,

 

Juan Eugenio Iglesias
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