On Jun 25, 2015, at 13:36, Allison Moreau <almoreau@nmr.mgh.harvard.edu> wrote:

Hi Falk and Thomas,

We are actually working on testing the -hires flag now for the v6 release. We intend to release it with v6.

-Allison 

On 06/25/2015 07:09 AM, Falk Lüsebrink wrote:

Hi Thomas,

 

this looks like a really nice script and a lot better than my own. In the upcoming release of FreeSurfer v.6 my work-around probably is not needed anymore. However, I haven’t been able to have a look at the dev release yet and whether the standard recon-all features a flag to process high resolution data.

 

Best,

Falk

 

P.S. Following your instructions one will definitely become a coffee junkie. :D

 

Von: freesurfer-bounces@nmr.mgh.harvard.edu [mailto:freesurfer-bounces@nmr.mgh.harvard.edu] Im Auftrag von Emmerling Thomas (PSYCHOLOGY)
Gesendet: Mittwoch, 24. Juni 2015 14:35
An: freesurfer@nmr.mgh.harvard.edu
Betreff: [Freesurfer] recon-all pipeline for (sub-millimeter) 7T data

 

Hello!

 

I wrote a bash script some time ago to process data acquired at a sub-millimeter resolution following the nice wiki entry of Falk Lüsebrink (https://surfer.nmr.mgh.harvard.edu/fswiki/HiResRecon). I thought it might be helpful for others, too, as there are some questions about it in the mailing list archives, so here it is: https://github.com/thomastweets/freesurfer-7t-pipeline. I am happy about any comments!

 

Best,

Thomas

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