One of my brains had a problem when doing trac-all -path analysis. Please see below the complete pathway. Thanks so much for your help.

csh::alanf@cerebro [/autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons] : trac-all -path -c /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/dmrirc-104
INFO: SUBJECTS_DIR is /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons
INFO: Diffusion root is /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/
Actual FREESURFER_HOME /autofs/cluster/freesurfer/centos6_x86_64/stable5_3_0
trac-paths -c /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/scripts/dmrirc.local -log /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/scripts/trac-all.log -cmd /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/scripts/trac-all.cmd
#-------------------------------------
/usr/local/freesurfer/stable5_3_0//bin/trac-paths
#-------------------------------------
#@# Path reconstruction Wed Aug 14 13:36:21 EDT 2013
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cst_AS_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cst_AS_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.unc_AS_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.unc_AS_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ilf_AS_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ilf_AS_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fmajor_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fminor_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.atr_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.atr_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ccg_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ccg_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cab_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cab_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slfp_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slfp_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slft_PP_avg33_mni_bbr
rm -rf /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slft_PP_avg33_mni_bbr
/usr/local/freesurfer/stable5_3_0//bin/dmri_paths --outdir /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cst_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cst_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.unc_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.unc_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ilf_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ilf_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fmajor_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fminor_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.atr_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.atr_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ccg_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ccg_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cab_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cab_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slfp_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slfp_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slft_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slft_PP_avg33_mni_bbr --dwi /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/dwi.nii.gz --grad /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvecs --bval /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvals --mask /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/aparc+aseg_mask.bbr.nii.gz --bpdir /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz --roi2 /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz --reg /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/xfms/diff2mni.bbr.mat --init /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_6.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_6.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_7.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_4.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_4.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5.txt --nprior /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsnnids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsnnids_all --lprior /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsids_all --seg /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 7500 --nu 0 --nk 5 --sdp /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_6_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_6_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_7_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_4_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_4_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5_std.txt


cwd /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons
cmdline /usr/local/freesurfer/stable5_3_0//bin/dmri_paths --outdir /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cst_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cst_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.unc_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.unc_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ilf_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ilf_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fmajor_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fminor_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.atr_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.atr_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ccg_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ccg_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cab_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cab_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slfp_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slfp_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slft_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slft_PP_avg33_mni_bbr --dwi /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/dwi.nii.gz --grad /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvecs --bval /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvals --mask /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/aparc+aseg_mask.bbr.nii.gz --bpdir /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri.bedpostX --ntr 2 --fmin 0.05 --roi1 /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_end1_dil.nii.gz 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/autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsprior_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsids_all --seg /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/mni/aparc+aseg.nii.gz --nb 200 --ns 7500 --nu 0 --nk 5 --sdp /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_6_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_6_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_7_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_4_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_4_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5_std.txt
sysname  Linux
hostname cerebro
machine  x86_64
user     alanf
Output directory: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cst_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cst_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.unc_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.unc_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ilf_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ilf_AS_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fmajor_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/fminor_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.atr_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.atr_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.ccg_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.ccg_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.cab_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.cab_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slfp_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slfp_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/lh.slft_PP_avg33_mni_bbr /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dpath/rh.slft_PP_avg33_mni_bbr
DWIs: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/dwi.nii.gz
Gradients: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvecs
B-values: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvals
Mask: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/aparc+aseg_mask.bbr.nii.gz
BEDPOST directory: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri.bedpostX
Max number of tracts per voxel: 2
Tract volume fraction threshold: 0.05
Initial control point file: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_6.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_6.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_7.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_4.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_4.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5.txt
End ROI 1: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end1_dil.nii.gz
End ROI 2: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_end2_dil.nii.gz
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Neighbor aseg prior set: 14
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Local aseg label ID list: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.cst_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.unc_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.unc_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.ilf_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.ilf_AS_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/fmajor_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/fminor_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.atr_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.atr_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.ccg_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.ccg_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cab_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.cab_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.slfp_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.slfp_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.slft_PP_avg33_mni_bbr_fsids_all /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/rh.slft_PP_avg33_mni_bbr_fsids_all
Local aseg prior set: 15
Segmentation map:  /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/aparc+aseg.nii.gz
DWI-to-atlas affine registration: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dmri/xfms/diff2mni.bbr.mat
Number of burn-in samples: 200
Number of post-burn-in samples: 7500
Keep every: 5-th sample
Update proposal every: 0-th sample
Initial proposal SD file: /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.cst_AS_avg33_mni_bbr_cpts_6_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.cst_AS_avg33_mni_bbr_cpts_6_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.unc_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.unc_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.ilf_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.ilf_AS_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/fmajor_PP_avg33_mni_bbr_cpts_7_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/fminor_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.atr_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.atr_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.ccg_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.ccg_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.cab_PP_avg33_mni_bbr_cpts_4_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.cab_PP_avg33_mni_bbr_cpts_4_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.slfp_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.slfp_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/lh.slft_PP_avg33_mni_bbr_cpts_5_std.txt /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/diff/rh.slft_PP_avg33_mni_bbr_cpts_5_std.txt
Loading DWIs from /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/dwi.nii.gz
Loading mask from /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dlabel/diff/aparc+aseg_mask.bbr.nii.gz
Loading BEDPOST parameter samples from /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri.bedpostX
Loading b-values from /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvals
Loading gradients from /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons//BW_104/dmri/bvecs
INFO: Found 10 baseline images (b = 0) out of a total of 70 frames
INFO: Found 182362 voxels in brain mask
INFO: Resolution of DWI space relative to base space is (1, 1, 1)
Loading atlas reference volume from /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz
niiRead(): error opening file /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz
ERROR: Could not read /autofs/space/dali_003/users/BW_project_DTI/FreeSurfer_5.3_Data/diffusion_recons/BW_104/dlabel/mni/lh.cst_AS_avg33_mni_bbr_end1_dil.nii.gz
Linux cerebro 2.6.32-358.2.1.el6.x86_64 #1 SMP Wed Mar 13 00:26:49 UTC 2013 x86_64 x86_64 x86_64 GNU/Linux

trac-paths exited with ERRORS at Wed Aug 14 13:37:20 EDT 2013