External Email - Use Caution        

Hello!

I am trying to run recon-all but it only converted the original image to .mgz and finished without error. I checked all other folders and it's empty. Attached please find the recon-all.log. 

The command line I used is

recon-all -i hc01.nii -s hc01 -sd /home/zlin/Documents/MDD_CVR/control

Could you please help me check what happens here? 

Thanks a lot,

Zixuan. 

_______________________________________________
Freesurfer mailing list
Freesurfer@nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/freesurfer