Dear FreeSurfer experts,
I would like to enquire about the command mri_extract_label. More specifically I am looking for information about the -erode argument. Therefore I have a few questions:
-
Is a 3D erosion of the entire brain or a 2D slice by slice erosion used?
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What structuring element (regarding the shape and size of the kernel) is used for the erosion for a given argument value (e.g. for the command
mri_extract_label -erode 1)?
Thank you in advance!