Yes, I think that is correct

Bruce

 

From: freesurfer-bounces@nmr.mgh.harvard.edu <freesurfer-bounces@nmr.mgh.harvard.edu> On Behalf Of Ellie Shaw
Sent: Wednesday, September 7, 2022 7:32 PM
To: Freesurfer support list <freesurfer@nmr.mgh.harvard.edu>
Subject: Re: [Freesurfer] ERROR! FOV=288.000 > 256

 

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Hi, 

 

Thank you for your help! 

 

I have little prior knowledge using freesurfer can I confirm which is probably a silly question - that when adding thr -cw256 to the command line it will look like this: 

 

recon-all -subject subjectname -i invol1 <-i invol2> -all -cw256

 

Kindest regards, 

Ellie 

 

On Thu, 8 Sep 2022 at 2:50 am, Douglas N. Greve <dgreve@mgh.harvard.edu> wrote:

Yes, some of the commands inside recon-all do not support a field of view over 256mm, which yours apparently is. I keep meaning to fix this, but we only see it once a year or so and I forget. In any event, just add -cw256 to the command line.

On 9/6/2022 10:51 PM, Ellie Shaw wrote:

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Hi there, 

 

I am attempting to perform the recon-all command for my T1 nii file.

 

When I run the recon-all command I get the following error message: 

 

ERROR! FOV=288.000 > 256

Include the flag -cw256 with recon-all!

Inspect orig.mgz to ensure the head is fully visible.

 

I am seeking some support to overcome this issue - I understand this would include the flag -cw256.

 

Freesurfer version: freesurfer-darwin-macOS-7.2.0-20210713-aa8f76b

Platform: OSX 7.2.0

Recon-all.log file attached below

 

Thank you in advance!

 

Kind regards, 

Ellie

 

 

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