Hi FreeSurfer community,

when I run mri_coreg I get the following error.

 /XYZ/2123/mri/brainmask.mgz is in the specified location.

Can you help me with this?

Thanks!

Boris 

mri_coreg --s 2123 --mov /XYZ/2123.nii --reg 2123.reg.lta 

Could not set locale

No such file or directory

Could not set locale

$Id: mri_coreg.c,v 1.27 2016/04/30 15:11:49 greve Exp $

cwd /home/demenzbild

cmdline mri_coreg --s 2123 --mov /XYZ/2123.nii --reg 2123.reg.lta 

sysname  Linux

hostname XXX

machine  x86_64

user     d

dof    6

nsep    2

cras0    1

ftol    0.000000

linmintol    0.001000

bf       1

bflim    30.000000

bfnsamp    30

SmoothRef 0

SatPct    99.990000

MovOOB 0

optschema 1

Reading in mov /XYZ/2123.nii

WARNING: 78694 NaNs found in volume /XYZ/2123.nii...

No such file or directory

Reading in ref /XYZ/2123/mri/brainmask.mgz

mghRead(/XYZ/2123/mri/brainmask.mgz, -1): could not open file