[Mne_analysis] mne_make_movie
Diana Omigie
d.omigie at gmail.com
Tue Dec 4 18:06:25 EST 2012
Hi,
I am trying to save images from an stc file using the code below.
mne_make_movie \
--subject fsaverage \
--smooth 5 \
--stcin '/Users/bullshot/Desktop/stc/
Grand_audiominusAV_dSPM_inv' \
--tmin -200 \
--tmax 600 \
--tstep 100 \
--pickrange \
--noscalebar \
--nocomments \
--jpg '/Users/bullshot/Desktop/stc/Grand_audiominusAV_dSPM_inv.jpg' \
--fthresh 0 --fmid 0.0666 --fmax 0.1
However I get an error saying 'no such file or directory' ( exact output
below) and obtain a jpg file that 'cannot be opened because it is empty'. I
would be grateful for any insights.
Diana
mne_make_movie version 1.34 compiled at Dec 21 2009 19:51:06
Create movies and tif, rgb, jpeg, png, or w files using a precomputed
inverse operator decomposition
stc input file :
/Users/bullshot/Desktop/stc/Grand_audiominusAV_dSPM_inv
JPEG output : /Users/bullshot/Desktop/stc/output.jpg
The input stc file will be assumed to contain
current expectation value data
Subject : fsaverage
Visualization surface : inflated
Process both hemispheres
Magnification factor : 1.00
Thresholding:
fthresh : 0.00
fmid : 0.07
fslope : 29.94
fmax : 0.10
-------------------------------------------------------------------
600 x 400 off-screen rendering initialized.
Selected view called 'lat'
-------------------------------------------------------------------
read stc file /Users/bullshot/Desktop/stc/Grand_audiominusAV_dSPM_inv-lh.stc
read stc file /Users/bullshot/Desktop/stc/Grand_audiominusAV_dSPM_inv-rh.stc
-------------------------------------------------------------------
Loading inflated surfaces for subject fsaverage...
Triangle file : created by nicks on Wed Aug 15 21:20:39 2007 nvert = 163842
ntri = 327680
Triangle and vertex normals and neighboring triangles...[done]
Vertex neighbors...[done]
Distances between neighboring vertices...[983040 distances done]
Triangle file : created by nicks on Wed Aug 15 21:20:57 2007 nvert = 163842
ntri = 327680
Triangle and vertex normals and neighboring triangles...[done]
Vertex neighbors...[done]
Distances between neighboring vertices...[983040 distances done]
-------------------------------------------------------------------
Parameters set.
-------------------------------------------------------------------
No movie production requested.
-------------------------------------------------------------------
Some timeframes selected. Outputting jpeg files (from stc files)
MNE at t = 0.0 ms...lh : 0 .. 0 ave = 0 rh : 0
.. 0 ave = 0
system : No such file or directory
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