[Homer-users] AtlasViewer using Infant Heads

[Adam Stone]

I am quite interested in this information as well. I do wonder if the MRI
templates from this webpage could be used with AtlasViewer--they have
infant templates here.
http://jerlab.psych.sc.edu/NeurodevelopmentalMRIDatabase/

Adam

__________
Adam Stone
PhD Candidate, Educational Neuroscience
Petitto Brain & Language Laboratory for Neuroimaging (BL2)
Gallaudet University | http://petitto.gallaudet.edu

On Tue, Aug 11, 2015 at 10:09 AM, Marina Winkler <winklerm at cbs.mpg.de>
wrote:

> Dear Ryota and mailinglist,
>
> I believe I have the same issue, I would need a good MNI atlas of a 5 or 6
> m.o. infant for Atlas Viewer,
> does anybody have one by chance - or know whom to contact to get one?
>
> And I would also need a step by step explanation, on how to combine it
> with our 3D digitized points in Atlasviewer...
>
> Thanks for your help,
> Marina
>
>
> PhD student at the Max Planck Institute Cognitive and Brain Sciences
> Leipzig
>
> ----- Original Message -----
> From: "Ryota Nishiyori" <ryonish at umich.edu>
> To: "homer-users" <homer-users at nmr.mgh.harvard.edu>
> Sent: Friday, August 7, 2015 7:42:50 PM
> Subject: [Homer-users] AtlasViewer using Infant Heads
>
> To AtlasViewer users,
>
> I would like to use AtlasViewer to project my probe from SDgui and/or
> digitized points from Polhemus (Patriot) onto an infant (6 to 12 months of
> age) head and/or brain.
> Based on the paper by Aasted et al. (2015), I will need to use an MR
> image, run it through FreeSurfer, and get the necessary files for
> AtlasViewer to run properly.
>
> Are there any alternatives? Or can anyone offer advice (ideally step by
> step) on FreeSurfer to get those necessary files for AtlasViewer?
>
> I've also tried to use the files in the AtlasViewer package under
> "NeonatalHeadModels", but I see that the same files in "Colin" are not in
> those folders under NeonatalHeadModels> xx wks > anatomical. Thus,
> AtlasViewer does not run properly after selecting that folder.
>
> Any suggestions or feedback would be greatly appreciated.
> Thank you for your time,
>
> --
> Ryota Nishiyori, MS
> Doctoral Candidate
> Developmental Neuromotor Control Lab
> School of Kinesiology
> University of Michigan
> 401 Washtenaw Ave.
> Ann Arbor, MI 48109-2214
>
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