[Mne_analysis] Error when using mne_make_movie

Michael W. Cole mwcole at gmail.com
Mon Jun 30 16:15:14 EDT 2008
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Hello,

I'm trying to use mne_make_movie to extract .w files. However, I am getting
an error message when calling mne_make_movie (reproduced below). Any idea
what might be causing this error?

Could this have something to do with the 64-bit libraries I'm using?

Thank you in advance for your help.

Michael


Here is the command I'm running:

> mne_make_movie --inv test_oct-6-inv.fif --meas test-gave.fif --set 2 --tmin
> 0 --tmax 1000 --tstep 1 --pick 751 --bmin -200 --bmax 0 --spm
> --picknormalcomp --subject 409 --smooth 5 --fthresh 5 --fmid 10 --fmax 15
> --w test
>


Here is the error message:

> Some timeframes selected. Outputting w files (from data)
>
> dSPM at t =   751.0 ms...*** glibc detected ***
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie: free():
> invalid pointer: 0x000000000fc26d70 ***
> ======= Backtrace: =========
> /lib64/libc.so.6[0x2b3ed51f98fe]
> /lib64/libc.so.6(cfree+0x76)[0x2b3ed51faf36]
>
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie[0x407767]
>
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie[0x408e6a]
>
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie[0x405aca]
> /lib64/libc.so.6(__libc_start_main+0xf4)[0x2b3ed51aaae4]
>
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie[0x403dca]
> ======= Memory map: ========
> 00400000-0046f000 r-xp 00000000 08:04 54086267
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie
> 0056e000-00575000 rw-p 0006e000 08:04 54086267
> /usr/data/apps/mne/bin/mne/x86_64-unknown-linux-gnu/mne_make_movie
> 00575000-0fd4e000 rw-p 00575000 00:00 0
> [heap]
> 3fd9f00000-3fd9f51000 r-xp 00000000 08:04 23592971
> /usr/data/apps/mne/libs/lapack-blas/lib/x86_64-unknown-linux-gnu/libblas.so.3.0.3
> 3fd9f51000-3fda050000 ---p 00051000 08:04 23592971
> /usr/data/apps/mne/libs/lapack-blas/lib/x86_64-unknown-linux-gnu/libblas.so.3.0.3
> 3fda050000-3fda051000 rw-p 00050000 08:04 23592971
> /usr/data/apps/mne/libs/lapack-blas/lib/x86_64-unknown-linux-gnu/libblas.so.3.0.3
> 3fda300000-3fda6e7000 r-xp 00000000 08:04 23592966
> /usr/data/apps/mne/libs/lapack-blas/lib/x86_64-unknown-linux-gnu/liblapack.so.3.0.3
> 3fda6e7000-3fda7e7000 ---p 003e7000 08:04 23592966
> /usr/data/apps/mne/libs/lapack-blas/lib/x86_64-unknown-linux-gnu/liblapack.so.3.0.3
> 3fda7e7000-3fda7eb000 rw-p 003e7000 08:04 23592966
> /usr/data/apps/mne/libs/lapack-blas/lib/x86_64-unknown-linux-gnu/liblapack.so.3.0.3
> 3fda7eb000-3fda8ef000 rw-p 3fda7eb000 00:00 0
> 2b3ed40ee000-2b3ed410a000 r-xp 00000000 08:03 1128318
> /lib64/ld-2.5.so
> 2b3ed410a000-2b3ed410c000 rw-p 2b3ed410a000 00:00 0
> 2b3ed410c000-2b3ed4141000 r--s 00000000 08:03 508410
> /var/run/nscd/passwd
> 2b3ed4142000-2b3ed42f5000 rw-p 2b3ed4142000 00:00 0
> 2b3ed430a000-2b3ed430c000 rw-p 0001c000 08:03 1128318
> /lib64/ld-2.5.so
> 2b3ed430c000-2b3ed4329000 r-xp 00000000 08:04 25350397
> /usr/lib64/libg2c.so.0.0.0
> 2b3ed4329000-2b3ed4528000 ---p 0001d000 08:04 25350397
> /usr/lib64/libg2c.so.0.0.0
> 2b3ed4528000-2b3ed452a000 rw-p 0001c000 08:04 25350397
> /usr/lib64/libg2c.so.0.0.0
> 2b3ed452a000-2b3ed452e000 rw-p 2b3ed452a000 00:00 0
> 2b3ed452e000-2b3ed4536000 r-xp 00000000 08:04 54086213
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libOSMesa.so.6.2.060200
> 2b3ed4536000-2b3ed4636000 ---p 00008000 08:04 54086213
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libOSMesa.so.6.2.060200
> 2b3ed4636000-2b3ed4637000 rw-p 00008000 08:04 54086213
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libOSMesa.so.6.2.060200
> 2b3ed4637000-2b3ed4877000 r-xp 00000000 08:04 54086214
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libGL.so.1.5.060200
> 2b3ed4877000-2b3ed4977000 ---p 00240000 08:04 54086214
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libGL.so.1.5.060200
> 2b3ed4977000-2b3ed49bd000 rw-p 00240000 08:04 54086214
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libGL.so.1.5.060200
> 2b3ed49bd000-2b3ed49ca000 rw-p 2b3ed49bd000 00:00 0
> 2b3ed49ca000-2b3ed4a43000 r-xp 00000000 08:04 54086215
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libGLU.so.1.3.060200
> 2b3ed4a43000-2b3ed4b43000 ---p 00079000 08:04 54086215
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libGLU.so.1.3.060200
> 2b3ed4b43000-2b3ed4b4f000 rw-p 00079000 08:04 54086215
> /usr/data/apps/mne/libs/mesa/lib/x86_64-unknown-linux-gnu/libGLU.so.1.3.060200
> 2b3ed4b4f000-2b3ed4b50000 rw-p 2b3ed4b4f000 00:00 0
> 2b3ed4b50000-2b3ed4bd9000 r-xp 00000000 08:04 54086094
> /usr/data/apps/mne/libs/quicktime/lib/x86_64-unknown-linux-gnu/libquicktime.so.0.0.0
> 2b3ed4bd9000-2b3ed4cd8000 ---p 00089000 08:04 54086094
> /usr/data/apps/mne/libs/quicktime/lib/x86_64-unknown-linux-gnu/libquicktime.so.0.0.0
> 2b3ed4cd8000-2b3ed4cdb000 rw-p 00088000 08:04 54086094
> /usr/data/apps/mne/libs/quicktime/lib/x86_64-unknown-linux-gnu/libquicktime.so.0.0.0
> 2b3ed4cdb000-2b3ed4cdc000 rw-p 2b3ed4cdb000 00:00 0
> 2b3ed4cdc000-2b3ed4d33000 r-xp 00000000 08:04 27443856
> /usr/lib64/libtiff.so.3.8.2
> 2b3ed4d33000-2b3ed4f33000 ---p 00057000 08:04 27443856
> /usr/lib64/libtiff.so.3.8.2
> 2b3ed4f33000-2b3ed4f34000 r--p 00057000 08:04 27443856
> /usr/lib64/libtiff.so.3.8.2
> 2b3ed4f34000-2b3ed4f36000 rw-p 00058000 08:04 27443856
> /usr/lib64/libtiff.so.3.8.2
> 2b3ed4f36000-2b3ed4f8b000 r-xp 00000000 08:03 1128417
> /lib64/libm-2.5.so
> 2b3ed4f8b000-2b3ed518a000 ---p 00055000 08:03 1128417
> /lib64/libm-2.5.so
> 2b3ed518a000-2b3ed518c000 rw-p 00054000 08:03 1128417
> /lib64/libm-2.5.so
> 2b3ed518c000-2b3ed518d000 rw-p 2b3ed518c000 00:00 0
> 2b3ed518d000-2b3ed52c6000 r-xp 00000000 08:03 1128295
> /lib64/libc-2.5.so
> 2b3ed52c6000-2b3ed54c5000 ---p 00139000 08:03 1128295
> /lib64/libc-2.5.so
> 2b3ed54c5000-2b3ed54c8000 r--p 00138000 08:03 1128295
> /lib64/libc-2.5.so
> 2b3ed54c8000-2b3ed54ca000 rw-p 0013b000 08:03 1128295
> /lib64/libc-2.5.so
> 2b3ed54ca000-2b3ed54cf000 rw-p 2b3ed54ca000 00:00 0
> 2b3ed54cf000-2b3ed5601000 r-xp 00000000 08:04 27445514
> /usr/lib64/libX11.so.6.2.0
> 2b3ed5601000-2b3ed5801000 ---p 00132000 08:04 27445514
> /usr/lib64/libX11.so.6.2.0
> 2b3ed5801000-2b3ed5802000 r--p 00132000 08:04 27445514
> /usr/lib64/libX11.so.6.2.0
> 2b3ed5802000-2b3ed5809000 rw-p 00133000 08:04 27445514
> /usr/lib64/libX11.so.6.2.0
> 2b3ed5809000-2b3ed5819000 r-xp 00000000 08:04 27444071
> /usr/lib64/libXext.so.6.4.0
> 2b3ed5819000-2b3ed5a18000 ---p 00010000 08:04 27444071
> /usr/lib64/libXext.so.6.4.0
> 2b3ed5a18000-2b3ed5a1a000 rw-p 0000f000 08:04 27444071
> /usr/lib64/libXext.so.6.4.0
> 2b3ed5a1a000-2b3ed5a1b000 rw-p 2b3ed5a1a000 00:00 0
> 2b3ed5a1b000-2b3ed5a31000 r-xp 00000000 08:03 1128321
> /lib64/libpthread-2.5.so
> 2b3ed5a31000-2b3ed5c30000 ---p 00016000 08:03 1128321
> /lib64/libpthread-2.5.so
> 2b3ed5c30000-2b3ed5c32000 rw-p 00015000 08:03 1128321
> /lib64/libpthread-2.5.so
> 2b3ed5c32000-2b3ed5c36000 rw-p 2b3ed5c32000 00:00 0
> 2b3ed5c36000-2b3ed5cf9000 r-xp 00000000 08:04 27443848
> /usr/lib64/libstdc++.so.5.0.7
> 2b3ed5cf9000-2b3ed5ef8000 ---p 000c3000 08:04 27443848
> /usr/lib64/libstdc++.so.5.0.7
> 2b3ed5ef8000-2b3ed5ef9000 r--p 000c2000 08:04 27443848
> /usr/lib64/libstdc++.so.5.0.7
> 2b3ed5ef9000-2b3ed5f01000 rw-p 000c3000 08:04 27443848
> /usr/lib64/libstdc++.so.5.0.7
> 2b3ed5f01000-2b3ed5f13000 rw-p 2b3ed5f01000 00:00 0
> 2b3ed5f13000-2b3ed5f20000 r-xp 00000000 08:03 1128341
> /lib64/libgcc_s.so.1
> 2b3ed5f20000-2b3ed611f000 ---p 0000d000 08:03 1128341
> /lib64/libgcc_s.so.1
> 2b3ed611f000-2b3ed6121000 rw-p 0000c000 08:03 1128341
> /lib64/libgcc_s.so.1
> 2b3ed6121000-2b3ed6122000 rw-p 2b3ed6121000 00:00 0
> 2b3ed6122000-2b3ed6136000 r-xp 00000000 08:03 1128354
> /lib64/libz.so.1.2.3
> 2b3ed6136000-2b3ed6335000 ---p 00014000 08:03 1128354
> /lib64/libz.so.1.2.3
> 2b3ed6335000-2b3ed6337000 rw-p 00013000 08:03 1128354
> /lib64/libz.so.1.2.3
> 2b3ed6337000-2b3ed6339000 r-xp 00000000 08:03 1128331
> /lib64/libdl-2.5.so
> 2b3ed6339000-2b3ed6539000 ---p 00002000 08:03 1128331
> /lib64/libdl-2.5.so
> 2b3ed6539000-2b3ed653b000 rw-p 00002000 08:03 1128331
> /lib64/libdl-2.5.so
> 2b3ed653b000-2b3ed655c000 r-xp 00000000 08:04 27443592
> /usr/lib64/libjpeg.so.62.0.0
> 2b3ed655c000-2b3ed675b000 ---p 00021000 08:04 27443592
> /usr/lib64/libjpeg.so.62.0.0
> 2b3ed675b000-2b3ed675d000 rw-p 00020000 08:04 27443592
> /usr/lib64/libjpeg.so.62.0.0
> 2b3ed675d000-2b3ed675e000 rw-p 2b3ed675d000 00:00 0
> 2b3ed675e000-2b3ed6760000 r-xp 00000000 08:04 27443693
> /usr/lib64/libXau.so.6.0.0
> 2b3ed6760000-2b3ed695f000 ---p 00002000 08:04 27443693
> /usr/lib64/libXau.so.6.0.0
> 2b3ed695f000-2b3ed6961000 rw-p 00001000 08:04 27443693
> /usr/lib64/libXau.so.6.0.0
> 2b3ed6961000-2b3ed6966000 r-xp 00000000 08:04 27443695
> /usr/lib64/libXdmcp.so.6.0.0
> 2b3ed6966000-2b3ed6b65000 ---p 00005000 08:04 27443695
> /usr/lib64/libXdmcp.so.6.0.0
> 2b3ed6b65000-2b3ed6b67000 rw-p 00004000 08:04 27443695
> /usr/lib64/libXdmcp.so.6.0.0
> 2b3ed6b67000-2b3ed759d000 rw-p 2b3ed6b67000 00:00 0
> 2b3ed962d000-2b3eda20d000 rw-p 2b3ed962d000 00:00 0
> 2b3edc292000-2b3edcee9000 rw-p 2b3edc292000 00:00 0
> 2b3ee0000000-2b3ee0021000 rw-p 2b3ee0000000 00:00 0
> 2b3ee0021000-2b3ee4000000 ---p 2b3ee0021000 00:00 0
> 7fffd69a5000-7fffd69bc000 rw-p 7fffd69a5000 00:00 0
> [stack]
> ffffffffff600000-ffffffffffe00000 ---p 00000000 00:00 0
> [vdso]
> Aborted
>



-- 
Michael W. Cole
Ph.D. candidate, Center for Neuroscience
University of Pittsburgh
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