[Mne_analysis] mne_process_raw/averaging

Sarah Steinvorth ssteinv at nmr.mgh.harvard.edu
Thu Mar 27 09:50:11 EDT 2008
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Hi,

I get an error message when I try to average with mne_process_raw, 
saying "No active object to assign the name to".

When I name before outfile in the description/ave file I get the message
"misplaced outfile". Including the path to the outfile into the 
description file did not help. I do not get a log file.

The command was run on theta (using ave_encode.csh). I attached an 
example description file

Any help with this is greatly appreciated,
thanks, Sarah


P.S. Here is the full message when running ave_encode.csh

theta:ssteinv[9] ave_encode.csh

mne_process_raw version 1.36 compiled at Apr  5 2007 16:02:03
32-bit architecture. Using 600.00 Mbytes for ring buffers

--- Setting up the filter ---

Using a 4096-point FFT in filtering of raw data with 2048-sample tapers
bandpass =    0.0 (   0.0) ...   40.0 (   5.0) Hz
filter is off

--- Opening SBT_MEG_002_run1_4-8Hz_raw_meg.fif ---

STI 014 range set to 1.000000
Compensation in file : uncompensated
Setting up compensation data...
         No compensation set. Nothing more to do.
No compensation was requested.
A new compensation value (uncompensated) was assigned to 280 MEG channels.
No SSS data in SBT_MEG_002_run1_4-8Hz_raw_meg.fif
26 bad channels read from SBT_MEG_002_run1_4-8Hz_raw_meg.fif:
         MEG 0231 MEG 0241 MEG 0311 MEG 0331 MEG 0531 MEG 0611 MEG 0812 
MEG 0811 MEG 0941 MEG 1021 MEG 1113 MEG 1232 MEG 1231 MEG 1243 MEG 1241 
MEG 1431 MEG 1611 MEG 1621 MEG 1641 MEG 2011 MEG 2132 MEG 2143 MEG 2142 
MEG 2141 MEG 2613 MEG 2642
Ring buffer structure with 559 entries initialized
90 filter buffers needed
Ring buffer structure with 68 entries initialized
NOTE: Filter is presently switched off.
Raw data file SBT_MEG_002_run1_4-8Hz_raw_meg.fif:
         nchan  = 281
         nsamp  = 364800
         sfreq  = 600.615  Hz
         length = 607.377  sec
1213 events found in SBT_MEG_002_run1_4-8Hz_raw_meg-eve.fif
The current projection operator is:
         # 1 : axial-PCA-01 : 1 vecs : 102 chs MEG idle
         # 2 : axial-PCA-02 : 1 vecs : 102 chs MEG idle
         # 3 : axial-PCA-03 : 1 vecs : 102 chs MEG idle
         # 4 : axial-PCA-04 : 1 vecs : 102 chs MEG idle
Projections turned on.

--- Averaging according to SBT_MEG_002_run1_encode_ave_4-8Hz.ave ---

No active object to assign the name to

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