[Mne_analysis] again mne_surf2_bem problem
Elisabeth Fonteneau
elisabeth.fonteneau at mrc-cbu.cam.ac.uk
Tue Mar 10 07:39:25 EDT 2009
Dear all,
I am in the process of aligning MRI-MEG, and for some of my participants
(3 out of 22), I failed to create the output file with mne_surf2bem
below is the message error
*****************
Running mne_surf2bem on l18
mne_surf2bem version 1.4 compiled at Apr 5 2007 16:04:15
input file # 1 : /imaging/ef02/lexpro/subject/0327/surf/lh.smseghead
/ id = 4 / sigma N/A
output file : /imaging/ef02/lexpro/subject/0327/bem/0327-head.fif
New quad file : nvert = 193696 nquad = 193927
Triangle and vertex normals and neighboring triangles...[done]
Vertex neighbors...Too many neighbors for vertex 94524.
******************
One of my colleague here told me that it happened also for her and then
she tried to re-run the mkheadsurf command
and then the mne_surf2_bem
I tryied that with no luck
I also try to re-run the last step of recon-all -autorecon3 on
freesurfer to be sure that the output was not corrupted, again no success
Any advices would be appreciated
Elisabeth
--
**********************
Dr Elisabeth Fonteneau
MRC Cognition and Brain Sciences Unit
15 Chaucer Road
Cambridge CB2 7EF
England
Tel: +44 (0)1223 355294 (extension 263)
Fax: +44 (0)1223 359062
Email: elisabeth.fonteneau at mrc-cbu.cam.ac.uk
Web: http://www.mrc-cbu.cam.ac.uk/people/elisabeth.fonteneau/
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