[Mne_analysis] mne_analyze display problem for CentOS

Mon Apr 5 01:24:32 EDT 2010

Hi Yvonne,

My colleague has solved the display problem in centOS! We have to install
the Nvidia driver manually.

You can see an information here:
http://forums.opensuse.org/new-user-how-faq-read-only/unreviewed-how-faq/386125-install-nvidia-driver-manually.html

In our case, we do:

1. download the Nvidia driver

2. press ctrl + alt + F1

3. log in as the root

4. type "init 3"

5. change the path to the directory where you keep the Nvidia driver

6. type "sh *full-name-of-the-Nvidia-driver*"

7. type "init 5"

Then it is done!

Hope this message can help :)

Best,

Chun-Hsien

2010/3/29 <mne_analysis-request at nmr.mgh.harvard.edu>

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>   1. Re: Mne_analyze display problem (Yvonne.Fonken at mpi.nl)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Mon, 29 Mar 2010 14:53:38 +0200 (CEST)
> From: Yvonne.Fonken at mpi.nl
> Subject: Re: [Mne_analysis] Mne_analyze display problem
> To: mne_analysis at nmr.mgh.harvard.edu
> Message-ID: <38376.172.16.24.227.1269867218.squirrel at 172.16.24.227>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Hi all,
>
> I seem to have a similar problem with the display of the surface using the
> sample data in the tutorial. When I have loaded the inflated surface and
> the data in mne_analyze (12.14.3 of the tutorial), there is no surface
> displayed in the display area for current estimates (is that supposed to
> be so?) until I check the box 'show sketch' in 'Adjust''Estimates'. The
> surface displayed then shows only frontal cortex and some small patches
> (see attachment).
> I am working on a linux machine and have no freesurfer installed. Does
> anyone know what the problem is?
>
> Thanks!
>
> Yvonne Fonken
> Max Planck Institute for Psycholinguistics
>
>
>
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> > Today's Topics:
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> >    1. Re: mne_analyze display problem for CentOS (Chun-Hsien Hsu)
> >
> >
> > ----------------------------------------------------------------------
> >
> > Message: 1
> > Date: Fri, 5 Mar 2010 16:18:54 +0800
> > From: Chun-Hsien Hsu <u7305020 at gmail.com>
> > Subject: Re: [Mne_analysis] mne_analyze display problem for CentOS
> > To: mne_analysis at nmr.mgh.harvard.edu
> > Message-ID:
> >       <94a49ec91003050018t65e96de7o84c5f4aac7f00c42 at mail.gmail.com>
> > Content-Type: text/plain; charset="iso-8859-1"
> >
> > Hi,
> >
> > I try to load the surface of "fsaverage" on either centOS or Mac, and
> > have a problem which is the same with Jonathan's previous question.
> > Could anyone have the idea about how to solve this problem on CentOS
> > (the attached file has the screenshot)?
> >
> > Thanks.
> >
> > Chun-Hsien Hsu
> >
> >
> >
> >
> >
> > 2009/11/5  <mne_analysis-request at nmr.mgh.harvard.edu>:
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> >> ? 1. mne_analyze display problem for CentOS (Jonathan McDaniel)
> >>
> >>
> >> ----------------------------------------------------------------------
> >>
> >> Message: 1
> >> Date: Tue, 3 Nov 2009 15:21:52 -0500
> >> From: Jonathan McDaniel <jonmcd33 at hotmail.com>
> >> Subject: [Mne_analysis] mne_analyze display problem for CentOS
> >> To: <mne_analysis at nmr.mgh.harvard.edu>
> >> Message-ID: <COL109-W2983B0FCDFE9E45FB5BCF0CEB20 at phx.gbl>
> >> Content-Type: text/plain; charset="iso-8859-1"
> >>
> >>
> >> Hello fellow MNE users,
> >> When I try to view a surface in mne_analyze (running CentOS) I can only
> >> see a small tip of the brain. ?The surface is correctly viewed on a Mac
> >> using mne_analyze, so it does not appear to be the surface itself.
> >> I am guessing I am missing a library or two, since I have had to install
> >> several missing libraries so far. ?However, I do not receive any error
> >> messages in the terminal window, so I have no idea what libraries to
> >> install.
> >> Thanks for your help,
> >> Jonathan
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