[Mne_analysis] Calling inappropriate Talairach
Daniel G. Wakeman
dgwakeman at gmail.com
Thu Aug 12 15:42:04 EDT 2010
What do you get when you type echo $SUBJECT?
D
On 12 Aug 2010, at 20:37, msacchet at nmr.mgh.harvard.edu wrote:
> Thank you in advance,
>
> For a given subject, the Talairach transform from a different
> subject is
> being added when loading a surface in mne_analyze. For this subject
> there
> also appears to be abberation in further processing. How does
> mne_analyze
> call the Talairach when loading inflated surfaces? Does this
> indicate that
> I had the wrong subject set during a previous processing step? The
> given
> subject does have the correct talairach.xfm file, but for some reason
> another subject's Talairach is called. Here are the last few lines
> printed
> from my linux terminal (111's Talairach transform should be added,
> but as
> can be seen, 118's is being called):
>
> Reading
> /autofs/space/kerrlab_002/users/MNE_Analysis/KER_MBSR/subjects/
> KER_MBSR_111/mri/T1.mgz...[done]
> Adding Talairach transforms...read
> /autofs/space/kerrlab_002/users/MBSR_data/MRI_files/FREESURFER/
> KER_MBSR_118/mri/transforms/talairach.xfm...[done]
>
> Any idea what might be occuring?
>
> Thanks again,
>
> Matthew
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