[Mne_analysis] Calling inappropriate Talairach

matthew sacchet matthewsacchet at gmail.com
Thu Aug 12 15:45:57 EDT 2010
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When echoing the variable SUBJECT, KER_MBSR_111 is printed... and 118's
Talairach is still added when loading surfaces in mne_analyze

-matt

On Thu, Aug 12, 2010 at 3:42 PM, Daniel G. Wakeman <dgwakeman at gmail.com>wrote:

> What do you get when you type echo $SUBJECT?
>
> D
>
> On 12 Aug 2010, at 20:37, msacchet at nmr.mgh.harvard.edu wrote:
>
>  Thank you in advance,
>>
>> For a given subject, the Talairach transform from a different subject is
>> being added when loading a surface in mne_analyze. For this subject there
>> also appears to be abberation in further processing. How does mne_analyze
>> call the Talairach when loading inflated surfaces? Does this indicate that
>> I had the wrong subject set during a previous processing step? The given
>> subject does have the correct talairach.xfm file, but for some reason
>> another subject's Talairach is called. Here are the last few lines printed
>> from my linux terminal (111's Talairach transform should be added, but as
>> can be seen, 118's is being called):
>>
>> Reading
>>
>> /autofs/space/kerrlab_002/users/MNE_Analysis/KER_MBSR/subjects/KER_MBSR_111/mri/T1.mgz...[done]
>> Adding Talairach transforms...read
>>
>> /autofs/space/kerrlab_002/users/MBSR_data/MRI_files/FREESURFER/KER_MBSR_118/mri/transforms/talairach.xfm...[done]
>>
>> Any idea what might be occuring?
>>
>> Thanks again,
>>
>> Matthew
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