[Mne_analysis] Mne_analyze display problem

Yvonne.Fonken at mpi.nl Yvonne.Fonken at mpi.nl
Mon Mar 29 08:53:38 EDT 2010
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Hi all,

I seem to have a similar problem with the display of the surface using the
sample data in the tutorial. When I have loaded the inflated surface and
the data in mne_analyze (12.14.3 of the tutorial), there is no surface
displayed in the display area for current estimates (is that supposed to
be so?) until I check the box 'show sketch' in 'Adjust''Estimates'. The
surface displayed then shows only frontal cortex and some small patches
(see attachment).
I am working on a linux machine and have no freesurfer installed. Does
anyone know what the problem is?

Thanks!

Yvonne Fonken
Max Planck Institute for Psycholinguistics



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>    1. Re: mne_analyze display problem for CentOS (Chun-Hsien Hsu)
>
>
> ----------------------------------------------------------------------
>
> Message: 1
> Date: Fri, 5 Mar 2010 16:18:54 +0800
> From: Chun-Hsien Hsu <u7305020 at gmail.com>
> Subject: Re: [Mne_analysis] mne_analyze display problem for CentOS
> To: mne_analysis at nmr.mgh.harvard.edu
> Message-ID:
> 	<94a49ec91003050018t65e96de7o84c5f4aac7f00c42 at mail.gmail.com>
> Content-Type: text/plain; charset="iso-8859-1"
>
> Hi,
>
> I try to load the surface of "fsaverage" on either centOS or Mac, and
> have a problem which is the same with Jonathan's previous question.
> Could anyone have the idea about how to solve this problem on CentOS
> (the attached file has the screenshot)?
>
> Thanks.
>
> Chun-Hsien Hsu
>
>
>
>
>
> 2009/11/5  <mne_analysis-request at nmr.mgh.harvard.edu>:
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>> ? 1. mne_analyze display problem for CentOS (Jonathan McDaniel)
>>
>>
>> ----------------------------------------------------------------------
>>
>> Message: 1
>> Date: Tue, 3 Nov 2009 15:21:52 -0500
>> From: Jonathan McDaniel <jonmcd33 at hotmail.com>
>> Subject: [Mne_analysis] mne_analyze display problem for CentOS
>> To: <mne_analysis at nmr.mgh.harvard.edu>
>> Message-ID: <COL109-W2983B0FCDFE9E45FB5BCF0CEB20 at phx.gbl>
>> Content-Type: text/plain; charset="iso-8859-1"
>>
>>
>> Hello fellow MNE users,
>> When I try to view a surface in mne_analyze (running CentOS) I can only
>> see a small tip of the brain. ?The surface is correctly viewed on a Mac
>> using mne_analyze, so it does not appear to be the surface itself.
>> I am guessing I am missing a library or two, since I have had to install
>> several missing libraries so far. ?However, I do not receive any error
>> messages in the terminal window, so I have no idea what libraries to
>> install.
>> Thanks for your help,
>> Jonathan
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