[Mne_analysis] Error using mne_average_estimates

Alexandre Gramfort gramfort at nmr.mgh.harvard.edu
Sat Mar 31 04:47:57 EDT 2012
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hi Steve,

In case you have not solved your problem yet, can you share a couple
of stc files that cause
the problem and give me the exact command line you typed?

Alex

On Fri, Mar 30, 2012 at 8:30 PM, Stephen Politzer-Ahles
<politzerahless at gmail.com> wrote:
> Hello,
>
> I'm encountering an error running mne_average_estimates. The program
> successfully loads all my stc files and sets up the time scale, but then I
> get:
>
> Temporal resampling...
> /<path to my data>/subj001_ave-lh.stc .. LH .. [failed]
>
> Before running mne_average_estimates, I had first created an average brain
> in Freesurfer (make_average_subject), then created morph maps from each
> subject to the average brain (mne_make_morph_maps --from <subject> --to
> average), then for each subject did current estimates using mne_make_movie
> with "--morph average" specified, so for each subject I have both
> <subject>-lh.stc. and <subject>-rh.stc. For mne_average_estimates, my
> description file looks like this:
>
> stc /<path_to_my_data>/subj001_ave-lh.stc
> stc /<path_to_my_data>/subj001_ave-rh.stc
> stc /<path_to_my_data>/subj002_ave-lh.stc
> stc /<path_to_my_data>/subj002_ave-rh.stc
> stc /<path_to_my_data>/subj003_ave-lh.stc
> ...
> deststc /<path_to_my_data>/averagestc
>
> (I also tried the same thing but without including the "-lh.stc" and
> "-rh.stc" in my description file, but I got the same error.)
>
> Any suggestions or guidance would be greatly appreciated. Thank you very
> much!
> Steve Politzer-Ahles
>
> --
> Stephen Politzer-Ahles
> University of Kansas
> Linguistics Department
> http://www.linguistics.ku.edu/
>
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