[Mne_analysis] mne_process_raw: simple question

[Krieger, Donald N.]

Thanks for the help.  That did it.

Don

Don Krieger, Ph.D., D.ABNM
Department of Neurological Surgery
University of Pittsburgh
(412)648-9654
________________________________
From: Brian Coffman [bcoffman at mrn.org]
Sent: Monday, May 21, 2012 2:07 PM
To: Krieger, Donald N.
Cc: mne_analysis at nmr.mgh.harvard.edu
Subject: Re: [Mne_analysis] mne_process_raw: simple question

Hi Donald,
You should specify the output file (as well as log file and other definitions) in your "file.ave" in this format:

outfile         file.fif


I have included one of our ave files as a reference. Let me know if you have further questions!

On Mon, May 21, 2012 at 12:01 PM, Krieger, Donald N. <kriegerd at upmc.edu<mailto:kriegerd at upmc.edu>> wrote:
Hi Everyone,

I am using mne_process_raw to compute averaged MEG and am unable to get output without using the –gave switch.  Here’s an example:

./mne_process_raw –ave file.ave –events file.eve –raw data.fif –raw data.fif –gave output.fif

As you can see, I have to transit the data file twice to fool it into thinking it’s computing a grand average.  – Embarrassing – but it would be nice to know how to do it correctly.  Thanks.

Don

Don Krieger, Ph.D., D.ABNM
Department of Neurological Surgery
University of Pittsburgh
(412)648-9654<tel:%28412%29648-9654>


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