[Mne_analysis] mne_compute_raw_inverse

[Elisabeth Fonteneau]

Hello MNE_users,

I have a question regarding the command mne_compute_raw_inverse.

 

If I used that function with  --labeldir option,

the output will collapse all the labels  from the directory in one fif file,
and I have one average waveform per ROI requested

 

Example of command used:

mne_compute_raw_inverse --inv inv.fif --in subj.fif --labeldir
/label/subject/ --out output.fif 

 

Now I would like to export all the vertices within a ROI and not only one
waveform average per ROI

 

Example of command used:

mne_compute_raw_inverse --inv inv.fif --in subj.fif --label label.label
--out output.fif 

 

For this output I have now in the fif file my different vertices included in
the ROI, but at my surprise I have 3 vectors for each vertices (x,y,z)

I tried all the command (picknormalcomp, align_z) to obtain only one
component per vertices but for now with no success..

Is ther a "magic option" that I am not aware of ?

 

Best

Elisabeth

 

 

__________________________________________________________

 

Dr Elisabeth Fonteneau

Neurolex Group

Department of Psychology

University of Cambridge

Downing Street, Cambridge CB2 3EB, UK

Phone: +44 1223 333 548

Email:  <mailto:ef309 at cam.ac.uk> ef309 at cam.ac.uk

Web:  <http://www.neurolex.psychol.cam.ac.uk/directory/ef309@cam.ac.uk>
www.neurolex.psychol.cam.ac.uk/directory/ef309 at cam.ac.uk

 

 

 

 

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