[Mne_analysis] How to save figures in a loop without displaying them?

[Mainak Jas]

Hi Maria,

On Sun, Aug 17, 2014 at 7:27 PM, Maria Hakonen <maria.hakonen at gmail.com>
wrote:

> I have set the show parameter false as follows:
>  ica.plot_sources(epochttps://
> mail.google.com/mail/u/0/?tab=wm#label/m-lists%2FMNE_analysis/147e00e5cb0f01d8hs_bp,eog_inds,show=False
> )
>
>

> However, the figures are still shown. I wonder what could be wrong there?
>

It seems to me that you intend to use exclude=eog_inds but since you do not
pass it as a keyword argument, it might get interpreted differently and
give unexpected results. Is epochs_bp an instance of Epochs? I raised an
issue on github: https://github.com/mne-tools/mne-python/issues/1516 to fix
the problem with show=False. You should install the development version and
use show=False once this is fixed.

Mainak



> -Maria
>
>
>
> 2014-08-17 16:26 GMT+03:00 Alexandre Gramfort <
> alexandre.gramfort at telecom-paristech.fr>:
>
> hi Maria,
>>
>> > Thanks for the answer.
>> > However, the script seems to run very long time if ipython is started
>> > without --pylab qt flag. I wonder if there is any other ways to save the
>> > figures in the loop without displaying them?
>>
>> most viz functions have a show parameter that is true by default. Set it
>> to false to avoid showing the figures.
>>
>> HTH
>> Alex
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