[Mne_analysis] Temporal information in spatio-temporal clustering

[Denis-Alexander Engemann]

Hi Laetitia,

the general output of the family of functions that you mentioned is as
follows:

T_obs (unthresholded statistical map), clusters (the clusters), cluster_pv
(the cluster level p-value), H0 (the maximum cluster size / cluster stat).

the indices in `clusters` refer to the spatial and temporal locations.

In this example you can see how to make use of this information (at the
bottom):

http://martinos.org/mne/dev/auto_examples/stats/plot_cluster_stats_spatio_temporal_repeated_measures_anova.html#example-stats-plot-cluster-stats-spatio-temporal-repeated-measures-anova-py


I hope this helps,
best,
Denis


On Tue, Jul 22, 2014 at 3:53 PM, Laetitia Grabot <laetitia.grabot at gmail.com>
wrote:

> Dear list members,
>
> I did spatio-temporal clustering on my source data, following the example
> " Permutation t-test on source data with spatio-temporal clustering", based
> on the function spatio_temporal_cluster_1samp_test.  I saved the stc file
> containing my significant clusters, but I couldn't manage to retrieve
> temporal information about the clusters. If I understand well, the color
> value corresponds to the significant duration of one source in the cluster
> but we don't know at which time the cluster begins. What did I miss ?...
>
> Thanks in advance,
> Laetitia
>
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