[Mne_analysis] summary performance for ICA

Denis-Alexander Engemann denis.engemann at gmail.com
Sat Nov 29 15:12:05 EST 2014
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Hi Yuhan, dear list,

I meanwhile transformed my script into a function, improved the code and
added tests.

You can access it here:

https://github.com/dengemann/meeg-preprocessing

This is how the output looks like for the example script:

https://www.dropbox.com/s/j8r2ujbnsgq5njr/preprocessing-report-sample.html?dl=0

Feel free to use it, to suggest improvements or to contribute.

Best,
Denis




2014-11-03 22:55 GMT+01:00 Denis-Alexander Engemann <
denis.engemann at gmail.com>:

> Hi Yuhan,
>
> for the moment it would be great to just receive some feedback about it
> works for your data.
> I need to update the script, during the last week I singled out a series
> of issues with filtering, which are relevant
> for certain datasets. I still need to update this example accordingly. It
> will be more important to converge on and decide about the most general and
> relevant use cases before wrapping it in function. Also note that this is
> specifically fitted to MEG and EEG datasets which come with EOG and ECG
> recordings. The idea would be end up with a good preprocessing script that
> does the job well in 80% of the cases.
>
> Feel free to keep me posted about how it goes for you and don't hesitate
> to ask me if something is not clear or behaves unexpectedly.
>
> Best,
> Denis
>
>
>
>
>
> 2014-11-03 22:32 GMT+01:00 Chen, Yu-han <CHENY4 at email.chop.edu>:
>
>>  Thanks Dennis! This is very helpful.
>>
>>  I'm also trying to make the preprocessing script later become a
>> function. I will let you know how it goes.
>>
>>  Best, Yuhan
>>
>>   From: Denis-Alexander Engemann <denis.engemann at gmail.com>
>> Reply-To: Discussion and support forum for the users of MNE Software <
>> mne_analysis at nmr.mgh.harvard.edu>
>> Date: Monday, November 3, 2014 3:38 PM
>> To: The Children's Hospital of Philadelphia The Children's Hospital of
>> Philadelphia <cheny4 at email.chop.edu>
>> Cc: "<Mne_analysis at nmr.mgh.harvard.edu>" <
>> Mne_analysis at nmr.mgh.harvard.edu>
>> Subject: Re: [Mne_analysis] summary performance for ICA
>>
>>  become
>>
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