[Mne_analysis] using correlation as method for find_bads_ecg

[Alexandre Gramfort]

hi Lau,

would 'ECG003' be marked as bad? is it defined as an ECG channel
(check with pick_types)?

Alex

On Thu, Oct 16, 2014 at 12:15 AM, Lau Møller Andersen
<lau.andersen at cnru.dk> wrote:
> Dear list
>
> I can't get the correlation method to work for find_bads_ecg method
> It always returns the error: ValueError: ECG003 not in channel list
>
> method = 'correlation'
>
> ekgEpochs = mne.preprocessing.create_ecg_epochs(raw)
>
> ekgIndices, ekgScores = ica.find_bads_ecg(ekgEpochs, method=method)
>
>
> It is in the ekgEpochs as seen below
>
> ekgEpochs.info['ch_names'][:4]
> Out[8]: ['EOG001', 'EOG002', 'ECG003', 'MEG0111']
>
> it makes no difference whether I include ch_name = 'ECG003' in
> create_ecg_epochs or in find_bads_ecg
>
> Any thoughts on why this could be?
>
> I'm running MNE 0.8.5 on MacOSX 10.9.5
>
> Best
>
> Lau
>
>
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