[Mne_analysis] mne report error

Lau Møller Andersen lau.andersen at cnru.dk
Thu Oct 16 16:25:36 EDT 2014
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Hi Mainak

Sorry for not reading the tutorial properly! Thanks for your help!

Best

Lau
Den 16-10-2014 kl. 15:21 skrev Mainak Jas:
> Hi Lau,
>
> On Thu, Oct 16, 2014 at 11:07 PM, Lau Møller Andersen 
> <lau.andersen at cnru.dk <mailto:lau.andersen at cnru.dk>> wrote:
>
>     Hi Alex
>
>     I'm not sure it works as supposed to. I do have the files now as
>     the output below shows:
>
>     from mne.report import Report
>     from mne.datasets import sample
>
>     path = sample.data_path()
>     report = Report()
>
>
> you need to give the path of the folder you want to render. Something 
> like this:
> report.parse_folder(data_path=path,  pattern='*-eve.fif')  
> have a look at the tutorial here: 
> http://martinos.org/mne/dev/mne_report_tutorial.html
>
> Let us know if you still face problems.
>
> Best,
> Mainak
>
>     Embedding : jquery-1.10.2.min.js
>     Embedding : jquery-ui.min.js
>     Embedding : bootstrap.min.js
>     Embedding : jquery-ui.min.css
>     Embedding : bootstrap.min.css
>
>     I can also save the report just fine:
>     report.save('report.html')
>
>     The problem though is that the html is empty. I've attached a
>     screenshot. I hope I haven't overlooked something obvious.
>
>     Best
>
>     Lau
>
>
>     Den 16-10-2014 kl. 13:21 skrev Alexandre Gramfort:
>
>         hi Lau,
>
>         it should be fixed. Version 0.8.6 is on pypi.
>
>         https://pypi.python.org/pypi/mne
>
>         let us know if it works.
>
>         thanks for the bug report.
>
>         Alex
>
>         On Thu, Oct 16, 2014 at 7:10 PM, Lau Møller Andersen
>         <lau.andersen at cnru.dk <mailto:lau.andersen at cnru.dk>> wrote:
>
>             Hi Mainak
>
>             Of course: I installed anaconda by running the shell
>             script from their
>             website. (I think it was version 2.0 at the time, but in
>             the meantime I've
>             updated to 2.1.0.) Then I installed pip through anaconda
>             (conda install pip
>             (1.5.6) and then through pip I installed mne (pip install
>             mne (0.8.5))
>
>             The installations have been done the same way for my linux
>             and mac operating
>             systems
>
>             Best
>
>             Lau
>
>             Den 16-10-2014 kl. 12:03 skrev Mainak Jas:
>
>             Hi Lau,
>
>             Before I investigate further, can I know how did you
>             install mne-python on
>             your machine?
>
>             Mainak
>
>             On Thu, Oct 16, 2014 at 7:50 PM, Lau Møller Andersen
>             <lau.andersen at cnru.dk <mailto:lau.andersen at cnru.dk>>
>             wrote:
>
>                 Dear list
>
>                 When running the following commands from the mne
>                 report tutorial
>                 website, I get the following error.
>
>                         >from  mne.report  import  Report
>                         >from  mne.datasets  import  sample
>
>                 Generate the report:
>
>                             path  =  sample.data_path()
>                             report  =  Report()
>
>                 IOError: [Errno 2] No such file or directory:
>                 '/home/lau/anaconda/lib/python2.7/site-packages/mne/html/jquery-1.10.2.min.js'
>
>
>                 How do I install those missing files?
>                 I'm running python through anaconda (2.1.0) and I have
>                 the stable
>                 version of mne (0.8.5).
>
>                 It's the same issue on my mac 10.9.5 and my linux mint
>                 17 operating
>                 systems.
>
>                 Best
>
>                 Lau
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