[Mne_analysis] mne report error
Lau Møller Andersen
lau.andersen at cnru.dk
Thu Oct 16 16:25:36 EDT 2014
Hi Mainak
Sorry for not reading the tutorial properly! Thanks for your help!
Best
Lau
Den 16-10-2014 kl. 15:21 skrev Mainak Jas:
> Hi Lau,
>
> On Thu, Oct 16, 2014 at 11:07 PM, Lau Møller Andersen
> <lau.andersen at cnru.dk <mailto:lau.andersen at cnru.dk>> wrote:
>
> Hi Alex
>
> I'm not sure it works as supposed to. I do have the files now as
> the output below shows:
>
> from mne.report import Report
> from mne.datasets import sample
>
> path = sample.data_path()
> report = Report()
>
>
> you need to give the path of the folder you want to render. Something
> like this:
> report.parse_folder(data_path=path, pattern='*-eve.fif')
> have a look at the tutorial here:
> http://martinos.org/mne/dev/mne_report_tutorial.html
>
> Let us know if you still face problems.
>
> Best,
> Mainak
>
> Embedding : jquery-1.10.2.min.js
> Embedding : jquery-ui.min.js
> Embedding : bootstrap.min.js
> Embedding : jquery-ui.min.css
> Embedding : bootstrap.min.css
>
> I can also save the report just fine:
> report.save('report.html')
>
> The problem though is that the html is empty. I've attached a
> screenshot. I hope I haven't overlooked something obvious.
>
> Best
>
> Lau
>
>
> Den 16-10-2014 kl. 13:21 skrev Alexandre Gramfort:
>
> hi Lau,
>
> it should be fixed. Version 0.8.6 is on pypi.
>
> https://pypi.python.org/pypi/mne
>
> let us know if it works.
>
> thanks for the bug report.
>
> Alex
>
> On Thu, Oct 16, 2014 at 7:10 PM, Lau Møller Andersen
> <lau.andersen at cnru.dk <mailto:lau.andersen at cnru.dk>> wrote:
>
> Hi Mainak
>
> Of course: I installed anaconda by running the shell
> script from their
> website. (I think it was version 2.0 at the time, but in
> the meantime I've
> updated to 2.1.0.) Then I installed pip through anaconda
> (conda install pip
> (1.5.6) and then through pip I installed mne (pip install
> mne (0.8.5))
>
> The installations have been done the same way for my linux
> and mac operating
> systems
>
> Best
>
> Lau
>
> Den 16-10-2014 kl. 12:03 skrev Mainak Jas:
>
> Hi Lau,
>
> Before I investigate further, can I know how did you
> install mne-python on
> your machine?
>
> Mainak
>
> On Thu, Oct 16, 2014 at 7:50 PM, Lau Møller Andersen
> <lau.andersen at cnru.dk <mailto:lau.andersen at cnru.dk>>
> wrote:
>
> Dear list
>
> When running the following commands from the mne
> report tutorial
> website, I get the following error.
>
> >from mne.report import Report
> >from mne.datasets import sample
>
> Generate the report:
>
> path = sample.data_path()
> report = Report()
>
> IOError: [Errno 2] No such file or directory:
> '/home/lau/anaconda/lib/python2.7/site-packages/mne/html/jquery-1.10.2.min.js'
>
>
> How do I install those missing files?
> I'm running python through anaconda (2.1.0) and I have
> the stable
> version of mne (0.8.5).
>
> It's the same issue on my mac 10.9.5 and my linux mint
> 17 operating
> systems.
>
> Best
>
> Lau
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