[Mne_analysis] What do people use for fMRI/MRI processing?

[Denis-Alexander Engemann]

On Fri, Nov 20, 2015 at 6:59 PM, Chris Holdgraf <choldgraf at berkeley.edu>
wrote:

> Good idea - will do. Don't MEG people do lots of MRI stuff? In tandem with
> source localization etc?
>
>
Actually less so, speaking for people I know. You don't need fMRI to source
localize MEG.


> On Fri, Nov 20, 2015 at 9:57 AM, Alexandre Gramfort <
> alexandre.gramfort at telecom-paristech.fr> wrote:
>
>> hi Chris,
>>
>> you should ask this question on the neuroimaging at python.org mailing
>> (former nipy list).
>>
>> anatomical registration is so far out of the scope of MNE but maybe
>> someone here can help using freesurfer/fsl tools I personally don't
>> master.
>>
>> Alex
>>
>>
>> On Fri, Nov 20, 2015 at 6:10 PM, Chris Holdgraf <choldgraf at berkeley.edu>
>> wrote:
>> > Hey all - I'm starting to get a bit into the world of MRI preprocessing
>> for
>> > an ECoG project. We have a number of tools in the lab that do this in
>> > Matlab, but I'm wondering if such tools exist in python as well.
>> >
>> > For example, a post-doc in our lab is one of the developers of
>> Fieldtrip,
>> > and he's been using their calls to SPM (or FSL) to do CT-MRI
>> coregistrations
>> > in Matlab. Does something like this exist in python, or do most people
>> go to
>> > an external package / use Matlab?
>> >
>> > Chris
>> >
>> > --
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>
>
> --
> _____________________________________
>
> PhD Candidate in Neuroscience | UC Berkeley <http://hwni.org/>
> Editor and Web Director | Berkeley Science Review
> <http://sciencereview.berkeley.edu/>
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