[Mne_analysis] Problem with plotting annotations

Nico Adelhöfer nico.adelhoefer at st.ovgu.de
Sat Aug 13 10:21:18 EDT 2016
Search archives:

For me it now says that the name 'int32' is not defined. When I  
exclude the dtype parameter, I get no error when plotting. :) But now  
I also don't see any annotations in the plot.



Quoting Mainak Jas <mainakjas at gmail.com>:

> okay. There seems to be some problem with the date in your measurement info.
>
> This should fix it:
>
> raw.info['meas_date'] = np.array([1463353331, 0], dtype=int32)
>
> Let us know if you still get the error after that.
>
> Mainak
>
> On Sat, Aug 13, 2016 at 1:23 AM, Nico Adelhöfer <nico.adelhoefer at st.ovgu.de>
> wrote:
>
>> Hello,
>>
>> I get:
>> array([1463353331])
>>
>> Nico
>>
>>
>> Quoting Mainak Jas <mainakjas at gmail.com>:
>>
>> > Hi Nico,
>> >
>> > Before we try to debug any further, can you let us know what
>> > raw.info['meas_date']
>> > looks like in your data?
>> >
>> > Mainak
>> >
>> > On Thu, Aug 11, 2016 at 7:21 PM, Nico Adelhöfer <
>> nico.adelhoefer at st.ovgu.de>
>> > wrote:
>> >
>> >> Hello,
>> >>
>> >> can someone tell me what the problem might be here? When trying to
>> >> plot annotations, I get an IndexError in the file annotations.py:
>> >>
>> >> --> 122         meas_date = meas_date[0] + meas_date[1] / 1000000.
>> >>
>> >> My commands are:
>> >>
>> >> onset = [1] # also tried [1 + raw.first_samp]
>> >> dur = [5]
>> >> raw.annotations = mne.Annotations(onset, dur, 'bad')
>> >> raw.plot() # here comes the error
>> >>
>> >> The raw file here is fif. I saved an edf using raw.save, cutting parts
>> >> from the beginning and the end of the recording. In the edf file there
>> >> is no error.
>> >>
>> >> Thanks,
>> >> Nico
>> >>
>> >> _______________________________________________
>> >> Mne_analysis mailing list
>> >> Mne_analysis at nmr.mgh.harvard.edu
>> >> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis
>> >>
>> >>
>> >> The information in this e-mail is intended only for the person to whom
>> it
>> >> is
>> >> addressed. If you believe this e-mail was sent to you in error and the
>> >> e-mail
>> >> contains patient information, please contact the Partners Compliance
>> >> HelpLine at
>> >> http://www.partners.org/complianceline . If the e-mail was sent to you
>> in
>> >> error
>> >> but does not contain patient information, please contact the sender and
>> >> properly
>> >> dispose of the e-mail.
>> >>
>> >>
>>
>>
>>
>> _______________________________________________
>> Mne_analysis mailing list
>> Mne_analysis at nmr.mgh.harvard.edu
>> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis
>>





More information about the Mne_analysis mailing list