[Mne_analysis] loading -ave.fif between mne versions
Talitha Ford
tcford at swin.edu.au
Sat Aug 13 22:20:19 EDT 2016
Thanks Alex (sorry for the late reply).
Your solution worked :)
Cheers,
Talitha
On 10 Aug 2016, at 23:07, Alexandre Gramfort <alexandre.gramfort at telecom-paristech.fr> wrote:
hi Talitha,
I've seen this in the past. Previously we were keeping the bad
channels in the info even if these channels were removed eg during
epoching with exclude='bads'.
the way out is (I think) to comment out the call to :
info._check_consistency()
in function read_meas_info in meas_info.py
when you've saved again all your files you can put this line back.
Let me know if this works.
HTH
Alex
On Wed, Aug 10, 2016 at 3:28 AM, Talitha Ford <tcford at swin.edu.au> wrote:
> Hi everyone,
>
> Sorry if I have missed something.
> I’m having some issues with compatibility between versions of mne. I have done all the preprocessing of my MEG data in mne 0.9.0, but now want to use the dipole fitting functions in mne 0.12.0 and 0.13.dev0. When I read in my -ave.fif I get RuntimeError: bad channel(s) [u'MEG2622', u'MEG0513', u'MEG1522', u'MEG0121', u'MEG0343', u'MEG0122', u'MEG1212', u'MEG2612', u'MEG1213', u'MEG1543', u'MEG0342', u'MEG0923', u'MEG1432', u'MEG0143', u'MEG2623', u'MEG0523', u'MEG0313', u'MEG0123'] marked do not exist in info.
>
> Is there a way to rectify this without having to go back and preprocess all the data again in version 0.13.0?
>
> Cheers,
> Talitha
>
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