[Mne_analysis] mne_watershed_bem problems

Alexandre Gramfort alexandre.gramfort at telecom-paristech.fr
Fri Feb 12 15:45:21 EST 2016
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hi,

see :

https://github.com/mne-tools/mne-python/blob/master/mne/commands/mne_watershed_bem.py

it's the code we use that is based on freesurfer commands.

HTH
Alex


On Fri, Feb 12, 2016 at 12:41 AM, Peng Zan <zanpeng.pz at gmail.com> wrote:
> Dear MNE experts,
>
> I am currently doing mne analysis and came into the problem with
> mne_watershed_bem. From this command, three files of inner and outer skull
> and outer skin surface were generated, but the outer skull reached outside
> of the outer skin surface so I was not able to go on to construct the the
> bem model and then the forward solution. Do you know what is the reason
> causing this error? And how do I fix this? Besides, I could not find the
> source code for mri_watershed command, which has its binary codes in the MNE
> package. Where can I find the source file, and how could I edit the
> algorithm to make any changes to MNE toolbox?
>
> Thank you very much!
>
> Best,
> Peng
>
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