[Mne_analysis] label.center_of_mass function?

Gladia Hotan gladiach at gmail.com
Mon Aug 14 16:38:54 EDT 2017
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Hi Eric,

That seems to have worked. Thanks!

Best,
Gladia

On Mon, Aug 14, 2017 at 4:34 PM, Eric Larson <larson.eric.d at gmail.com>
wrote:

> I'm not sure what the standard procedures are at MGH, but you can do `pip
> install --user` to install a new version to your specific user's directory.
>
> Eric
>
>
> On Mon, Aug 14, 2017 at 3:49 PM, Gladia Hotan <gladiach at gmail.com> wrote:
>
>> Hi Eric,
>>
>> I'm trying to update MNE on a Martinos Center computer but
>> pip install mne --upgrade
>> returns a 'Permission denied' error. How can I get the latest version at
>> the Martinos Center?
>>
>> Thanks and Best,
>> Gladia
>>
>> On Fri, Aug 11, 2017 at 3:39 PM, Gladia Hotan <gladiach at gmail.com> wrote:
>>
>>> Hi Eric,
>>>
>>> That must be it- my version is 0.11.0. I'll try to update and try again.
>>> Thanks!
>>>
>>> Best,
>>> Gladia
>>>
>>> On Fri, Aug 11, 2017 at 15:18 Eric Larson <larson.eric.d at gmail.com>
>>> wrote:
>>>
>>>> Are you on an old version of MNE (mne.__version__)? I get this on
>>>> latest `master` and the 0.14.1 branch:
>>>>
>>>> >>> label = mne.read_label(mne.datasets.sample.data_path() + '/subjects/sample/label/lh.BA45.label')
>>>> >>> label.center_of_mass('sample', subjects_dir=mne.datasets.sample.data_path() + '/subjects')
>>>> 136871
>>>>
>>>>>>>> Eric
>>>>
>>>>
>>>> On Fri, Aug 11, 2017 at 3:00 PM, Gladia Hotan <gladiach at gmail.com>
>>>> wrote:
>>>>
>>>>> Hi Eric,
>>>>>
>>>>> When I try to do label.center_of_mass I get the error "AttributeError:
>>>>> 'Label' object has no attribute 'center_of_mass'". However,
>>>>> SourceEstimate.center_of_mass does work. Do I need to do something to the
>>>>> label to access the function?
>>>>>
>>>>> Thanks and Best,
>>>>> Gladia
>>>>>
>>>>> On Fri, Aug 11, 2017 at 2:42 PM, Eric Larson <larson.eric.d at gmail.com>
>>>>> wrote:
>>>>>
>>>>>> Yes indeed:
>>>>>>
>>>>>> https://mne-tools.github.io/dev/generated/mne.Label.html#mne
>>>>>> .Label.center_of_mass
>>>>>>
>>>>>> Eric
>>>>>>
>>>>>>
>>>>>> On Fri, Aug 11, 2017 at 2:28 PM, Gladia Hotan <gladiach at gmail.com>
>>>>>> wrote:
>>>>>>
>>>>>>> Hi,
>>>>>>>
>>>>>>> Is there still the function label.center_of_mass which computes the
>>>>>>> spatial center of mass of a label?
>>>>>>>
>>>>>>> Thanks and Best Regards,
>>>>>>> Gladia
>>>>>>>
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