[Mne_analysis] ERROR: input(s) cannot have multiple frames

[Ritesh Mahajan]

Hello Alex,
Thanks for response.

Here is the output below :
niiRead(): NIFTI_UNITS_UNKNOWN, assuming mm
WARNING: niiRead(): unknown time units 0 in subject.nii
INFO: this is an unsiged short. I'll try to read it, but
      it might not work if there are values over 32k
Volume information for subject.nii
          type: nii
    dimensions: 180 x 268 x 1 x 268
   voxel sizes: 1.000000, 1.000000, 1.000000
          type: SHORT (4)
           fov: 180.000
           dof: 0
        xstart: -90.0, xend: 90.0
        ystart: -134.0, yend: 134.0
        zstart: -0.5, zend: 0.5
            TR: 0.00 msec, TE: 0.00 msec, TI: 0.00 msec, flip angle: 0.00 degrees
       nframes: 268
       PhEncDir: UNKNOWN
       FieldStrength: 0.000000
ras xform present
    xform info: x_r =   1.0000, y_r =   0.0000, z_r =   0.0000, c_r =    91.0000
              : x_a =   0.0000, y_a =   1.0000, z_a =   0.0000, c_a =   135.0000
              : x_s =   0.0000, y_s =   0.0000, z_s =   1.0000, c_s =     1.5000
Orientation   : RAS
Primary Slice Direction: axial

voxel to ras transform:
                1.0000   0.0000   0.0000     1.0000
                0.0000   1.0000   0.0000     1.0000
                0.0000   0.0000   1.0000     1.0000
                0.0000   0.0000   0.0000     1.0000

voxel-to-ras determinant 1

ras to voxel transform:
                1.0000   0.0000   0.0000    -1.0000
                0.0000   1.0000   0.0000    -1.0000
                0.0000   0.0000   1.0000    -1.0000
                0.0000   0.0000   0.0000     1.0000

Thanks,
Ritesh Mahajan

----- Original Message -----
From: "Alexandre Gramfort" <alexandre.gramfort at inria.fr>
To: "mne analysis" <mne_analysis at nmr.mgh.harvard.edu>
Sent: Sunday, August 20, 2017 8:46:29 PM
Subject: Re: [Mne_analysis] ERROR: input(s) cannot have multiple frames

hi,

can you show me the output of:

mri_info subject.nii

Best,
Alex


On Sun, Aug 20, 2017 at 4:47 PM, Ritesh Mahajan
<ritesh.mahajan at ripl.ricoh.com> wrote:
> Hello Alex,
>
> Yes, it is a T1 MR image.
>
> Thanks,
> Ritesh Mahajan
>
> ----- Original Message -----
> From: "Alexandre Gramfort" <alexandre.gramfort at inria.fr>
> To: "mne analysis" <mne_analysis at nmr.mgh.harvard.edu>
> Sent: Saturday, August 19, 2017 5:47:53 PM
> Subject: Re: [Mne_analysis] ERROR: input(s) cannot have multiple frames
>
> hi,
>
> are you sure subject.nii is T1 MR image?
>
> Alex
>
>
> On Fri, Aug 18, 2017 at 6:50 AM, Ritesh Mahajan
> <ritesh.mahajan at ripl.ricoh.com> wrote:
>> hello guys,
>> i tried to run recon-all on subject.nii, i am getting the following error.
>> "ERROR: input(s) cannot have multiple frames!
>> Subject has 268 frames."
>>
>> can someone help me out with this to know and resolve this error.
>>
>> Thank,
>> Ritesh Mahajan
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