[Mne_analysis] Setting the Marker channel

[Alexandre Gramfort]

hi,

just replace

data = raw.get_data()

by

data = raw[:, :][0]

the get_data method will appear in the next release.

Alex

On Sat, Jul 8, 2017 at 2:14 AM, Senaka Amarakeerthi <senakahks at gmail.com>
wrote:

> Dear Jaakko,
>
> Thank you for quick reply. I tried your code and it complains telling that
> 'Raw' object has no attribute 'get_data'.
>
>
> Here is the full report of error
>
> Opening raw data file /Users/Senaka/to_share-raw.fif...
> Isotrak not found
>     Range : 0 ... 55935 =      0.000 ...   436.992 secs
> Ready.
> Adding average EEG reference projection.
> 1 projection items deactivated
> Reading 0 ... 55935  =      0.000 ...   436.992 secs...
> Traceback (most recent call last):
>   File "/Users/Senaka//test.py", line 3, in <module>
>     data = raw.get_data()
> AttributeError: 'Raw' object has no attribute 'get_data'
>
>
> Thanks and regards,
>
> Senaka
>
>
>
> <https://mailtrack.io/> Sent with Mailtrack
> <https://mailtrack.io/install?source=signature&lang=en&referral=senakahks@gmail.com&idSignature=22>
>
> On Fri, Jul 7, 2017 at 7:49 PM, Jaakko Leppakangas <jaeilepp at gmail.com>
> wrote:
>
>> Hi,
>> it seems that the stim channel is assigned as EEG for some reason
>> (probably a mistake in the acquisition). Also the values on the stim
>> channel are micro scale causing the event finding to fail. Here's a short
>> script for fixing raw object.
>>
>> import mne
>> raw = mne.io.read_raw_fif('to_share-raw.fif', preload=True)
>> data = raw.get_data()
>> data[14] *= 1000000
>> raw = mne.io.RawArray(data, raw.info)
>> raw.set_channel_types({'STI 014': 'stim'})
>>
>> -Jaakko
>>
>>
>> On Fri, Jul 7, 2017 at 3:50 PM, Senaka Amarakeerthi <senakahks at gmail.com>
>> wrote:
>>
>>> Dear Alex,
>>>
>>> Please find the to_share-raw.fif file by accessing following link.
>>>
>>> https://www.dropbox.com/s/58ji93q7xj6nett/to_share-raw.fif?dl=0
>>>
>>> Best regards,
>>>
>>> Senaka
>>>
>>>
>>>
>>>
>>>
>>> <https://mailtrack.io/> Sent with Mailtrack
>>> <https://mailtrack.io/install?source=signature&lang=en&referral=senakahks@gmail.com&idSignature=22>
>>>
>>> On Fri, Jul 7, 2017 at 12:10 PM, Alexandre Gramfort <
>>> alexandre.gramfort at telecom-paristech.fr> wrote:
>>>
>>>> that's indeed unexpected.
>>>>
>>>> can you share the file?
>>>>
>>>> data.save('to_share-raw.fif')
>>>>
>>>> thx
>>>> Alex
>>>>
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