[Mne_analysis] Intracranial SEEG montage and layout
Andrea Brovelli
andrea.brovelli at univ-amu.fr
Tue Sep 19 09:55:52 EDT 2017
Indeed, I forced the update and I now see the file. Sorry for bothering
with this "minor issue"
Thanks again
Andrea
Le 19-Sep-17 à 3:40 PM, JR KING a écrit :
> You may have deleted the file accidentally? Try to force redownloading
> the file
>
> mne.datasets.misc.data_path(force_update=True)
>
> Hope that helps
>
> JR
>
> On 19 September 2017 at 05:22, Andrea Brovelli
> <andrea.brovelli at univ-amu.fr <mailto:andrea.brovelli at univ-amu.fr>> wrote:
>
> Thanks JR, yes I had tried that link.
>
> But it seems that the current misc data does not contain the ECoG
> dataset anymore. For example, I cannot find the
> '/ecog/sample_ecog.mat' file required for this line:
>
> mat = loadmat
> <http://docs.scipy.org/doc/scipy/reference/generated/scipy.io.loadmat.html#scipy.io.loadmat>(mne.datasets.misc.data_path() + '/ecog/sample_ecog.mat')
>
> In fact, I cannot find it in the dataset page:
> http://martinos.org/mne/stable/manual/datasets_index.html
> <http://martinos.org/mne/stable/manual/datasets_index.html>
>
> Any ideas?
>
> Thanks
>
> Andrea
>
>
>
> Le 18/09/2017 à 21:20, JR KING a écrit :
>> Hi Andrea,
>>
>> you can check
>> http://martinos.org/mne/stable/auto_tutorials/plot_ecog.html
>> <http://martinos.org/mne/stable/auto_tutorials/plot_ecog.html>
>>
>> JR
>>
>> On 18 September 2017 at 15:15, Andrea Brovelli
>> <andrea.brovelli at univ-amu.fr
>> <mailto:andrea.brovelli at univ-amu.fr>> wrote:
>>
>> Dear all,
>>
>> I am trying to import intracranial SEEG data into MNE.
>>
>> Can anyone point me to tutorials and examples on how to import
>> subject-specific SEEG electrode positions (3D) and to produce
>> a 3D or 2D
>> layout for plotting?
>>
>> For what I read, the function to be used is
>> mne.channels.DigMontage
>>
>> However, I cannot understand how to import channel position
>> and names
>> (and in which format they have to be)
>>
>> Thanks a lot
>>
>> Andrea
>>
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