[Mne_analysis] MNE in Matlab

[Adela Glez.]

Thank you, Sheraz.

To assemble the inv operator I had a look at mne_ex_compute_inverse and
there are a number of arguments (e.g., setno [data set number], lambda2,
sDPM, sLORETA), that complicate things since I don't know where to get
these values from or how to find them.

Ade

On 18 January 2018 at 14:20, Sheraz Khan, PhD <sheraz at nmr.mgh.harvard.edu>
wrote:

> Hi Ade,
>
> > 1- Is the MNE Matlab toolbox a limited version of the python one? I
> wonder
> > if I can perform the whole pipeline (compute fwd and inv solutions) with
> > the Matlab version.
>
> MNE Matlab toolbox is mostly for IO, and was designed to complement MNE-C
> toolbox. It can not compute fwd and inv solutions.
>
>
> > 2- If this is not possible, how to import in Matlab an already computed
> > inverse solution (oct-6-meg-inv.fif) into Matlab so I have the data ready
> > for further analysis in Matlab?
>
> You can use mne_read_inverse_operator.m function to read inv operator into
> Matlab, but you need to assemble it. Please see mne_ex_compute_inverse.m
> for example.
>
> HTH
>
> Best
>
> Sheraz
>
>
> > Hi everyone,
> >
> > Two questions:
> >
> > 1- Is the MNE Matlab toolbox a limited version of the python one? I
> wonder
> > if I can perform the whole pipeline (compute fwd and inv solutions) with
> > the Matlab version.
> > 2- If this is not possible, how to import in Matlab an already computed
> > inverse solution (oct-6-meg-inv.fif) into Matlab so I have the data ready
> > for further analysis in Matlab?
> >
> > Thank you,
> > Ade
> > _______________________________________________
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> > Mne_analysis at nmr.mgh.harvard.edu
> > https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis
>
>
> -------------------------
> Sheraz Khan, M.Eng, Ph.D.
> Instructor in Neurology
>
> Athinoula A. Martinos Center for Biomedical Imaging
> Massachusetts General Hospital
> Harvard Medical School
>
> McGovern Institute for Brain Research
> Massachusetts Institute of Technology
>
> Tel:   +1 617-643-5634
> Fax:   +1 617-948-5966
> Email: sheraz at nmr.mgh.harvard.edu
>        sheraz at mit.edu
> Web:   http://sheraz.mit.edu
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