[Mne_analysis] how to use viz.plot_alignment() on SEEG data?

[Eisenman, Lawrence]

This is very helpful, thanks.

Larry


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Message: 2
Date: Sun, 28 Jan 2018 22:10:37 +0100
From: Alexandre Gramfort <alexandre.gramfort at inria.fr>
Subject: Re: [Mne_analysis] how to use viz.plot_alignment() on SEEG
data?
To: Discussion and support forum for the users of MNE Software
<mne_analysis at nmr.mgh.harvard.edu>
Message-ID:
<CADeotZoe90EFhQuvidMSkt49u7h+dUL56+XmvrGqJ1emAYd3xw at mail.gmail.com>
Content-Type: text/plain; charset="UTF-8"

hi,

the PR is merged.

Here a tiny script I wrote that should get you started with these data:

https://gist.github.com/agramfort/3690a41529ffa9534701e6a330460f07

Note that I use neo to read the TRC file. We should have this reader via neo in the next release.

HTH
Alex


On Sat, Jan 27, 2018 at 6:12 PM, Alexandre Gramfort <alexandre.gramfort at inria.fr> wrote:
> hi Larry,
>
> indeed sEEG were ignored in plot_alignment.
>
> This PR should fix it:
> https://github.com/mne-tools/mne-python/pull/4903
>
> let us know directly on github if it does the job for you.
>
> thanks for reporting the issue.
>
> Best,
> Alex
>
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