[Mne_analysis] Data transferring from fieldtrip

[Alexandre Gramfort]

        External Email - Use Caution        

hi,

can you do the coreg if you start from the orignal raw files?

I am not sure if Fieldtrip and MNE know how to understand eachother
to have all the necessary metadata to do source reconstruction.

If your preprocessing and epoching is not too complex I would give
a try to MNE for this. It will guarantee that you have all the metadata.

Alex


‪On Tue, Jul 3, 2018 at 10:22 PM ‫נועה הכהן‬‎ <noa1hc at gmail.com> wrote:‬

>         External Email - Use Caution
>
> Hello,
>
> I work on data thet recorded in bti/4D system.I used fieldtrip for
> pre-processing and segmentation. Now I want to use MNE to perform source
> recognition.
>
> I used the FIELDTRIP2FIFF function to create fif file ,but MNE can not
> read the sensors position information, and the digitization from fif file.
>
>
>
> In addition, when I try to use  mne.gui.coregistration()
> <https://www.martinos.org/mne/stable/generated/mne.gui.coregistration.html#mne.gui.coregistration>
>  I can not upload the file that contains the digitization (hs_file), even
> though it exists in the folder.
>
>
>
> Does anyone have an experience with transferring data from fieldtrip?
> Especially bti data?
>
>
>
> Thanks, noa
>
>
> 2018-07-03 11:19 GMT+03:00 נועה הכהן <noa1hc at gmail.com>:
>
>> אם יש לך זמן להעיף מבט שאין פה שגיאות דרמטיות אני אשמח. לא דחוף, יכול
>> לחכות עד שתחזור בערב
>>
>>
>>
>> Hello,
>>
>> I work on data thet recorded in bti/4D system.I used fieldtrip for
>> pre-processing and segmentation. Now I want to use MNE to perform source
>> recognition.
>>
>> I used the FIELDTRIP2FIFF function to creat fif file ,but MNE can not
>> read the sensors position information, and the digitization from fif file.
>>
>>
>>
>> Also, when I try to use  mne.gui.coregistration()
>> <https://www.martinos.org/mne/stable/generated/mne.gui.coregistration.html#mne.gui.coregistration> I
>> can not upload the file that contains the digitization (hs_file), even
>> though it exists in the folder.
>>
>>
>>
>> Does anyone have experience transferring data from fieldtrip? Especially
>>   bti data?
>>
>>
>>
>> Thanks, noa
>>
>>
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