[Mne_analysis] Transform stc from head to MRI coordinate system?

[Lori Sanfratello]

        External Email - Use Caution        

Unfortunately, it seems to revert back to head coordinates at the fwd
step.  Any other possibilities?
Thanks,
Lori

On Tue, May 29, 2018 at 1:45 PM, Lori Sanfratello <lsanfratello at mrn.org> wrote:
> Thanks Eric! I will give it a try.
> Best,
> Lori
>
> On Tue, May 29, 2018 at 10:12 AM, Eric Larson <larson.eric.d at gmail.com> wrote:
>>         External Email - Use Caution
>>
>> I think that if you constructed your volume source space with the `mri`
>> argument and `add_interpolator=True`, then you should be able to do
>> `stc.save_as_volume(...)` or `as_volume` that will already properly be in
>> the same MRI coordinates as the `mri` you originally supplied. Does that
>> help?
>>
>> Eric
>>
>>
>> On Mon, May 28, 2018 at 5:42 PM, Lori Sanfratello <lsanfratello at mrn.org>
>> wrote:
>>>
>>>         External Email - Use Caution
>>>
>>> Hi, I would like my volumetric source estimate to be in MRI
>>> coordinates, is there a way to easily transform my stc, before I save
>>> it into nifti?
>>> Thank you for any advice!
>>> Best,
>>> Lori
>>> --
>>> Dr. L. Sanfratello, PhD
>>> Assistant Professor of Trans. Neuroscience
>>> The Mind Research Network,
>>> 1101 Yale Blvd NE
>>> Albuquerque, NM 87106
>>> 505 272-5557
>>>
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>
>
>
> --
> Dr. L. Sanfratello, PhD
> Assistant Professor of Trans. Neuroscience
> The Mind Research Network,
> 1101 Yale Blvd NE
> Albuquerque, NM 87106
> 505 272-5557



-- 
Dr. L. Sanfratello, PhD
Assistant Professor of Trans. Neuroscience
The Mind Research Network,
1101 Yale Blvd NE
Albuquerque, NM 87106
505 272-5557