[Mne_analysis] (no subject)

Eric Larson larson.eric.d at gmail.com
Wed Feb 20 09:27:09 EST 2019
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        External Email - Use Caution        

That is probably a bug, `vlines='auto'` should always work. We are probably
not dealing with it properly for your data. Can you open an issue on
GitHub? Also mention the `tmin` and `tmax` of your `evoked` instance, since
it could matter.

Eric


On Wed, Feb 20, 2019 at 8:57 AM Пилюгина Нина <aphina_n at outlook.com> wrote:

>         External Email - Use Caution
>
> Thank you, it's helped, but now I have another error with my data: vlines
> must be a list or tuple, not <class 'str'>
>
> This is my code:
> conditions = ['1', '2', '4']
> evoked_dict = dict()
> for condition in conditions:
>     evoked_dict[condition] = mne.read_evokeds(fname, baseline=(None, 0),
> proj=True, condition=condition)
> print(evoked_dict)
>
> colors = dict(Left="Crimson", Right="CornFlowerBlue")
>
> pick = evoked_dict['1'].ch_names.index('MEG0242')
>
> mne.viz.plot_compare_evokeds(evoked_dict, picks=pick, colors=colors,
> vlines='auto', split_legend=True)
>
> Seems problem with my data, because sample works. Is it something with
> epochs?
> ------------------------------
> *От:* mne_analysis-bounces at nmr.mgh.harvard.edu <
> mne_analysis-bounces at nmr.mgh.harvard.edu> от имени Victor Ferat <
> victor.ferat at fcbg.ch>
> *Отправлено:* 20 февраля 2019 г. 20:48
> *Кому:* Discussion and support forum for the users of MNE Software
> *Тема:* Re: [Mne_analysis] (no subject)
>
>
>         External Email - Use Caution
>
> Hi,
>
>
>
> I think that this error appears with matplotlib 3.0.1  which you’are
> currently using) (https://github.com/matplotlib/matplotlib/issues/12634 )
>
> It has been fixed in 3.0.2
>
> Try to upgrade matplotlib to 3.0.2 with the following command:
>
> pip install --upgrade matplotlib
>
>
>
>
>
> Best Regards,
>
> Victor
>
> *From:* mne_analysis-bounces at nmr.mgh.harvard.edu <
> mne_analysis-bounces at nmr.mgh.harvard.edu> *On Behalf Of *???????? ????
> *Sent:* mercredi 20 février 2019 13:22
> *To:* Alexandre Gramfort <alexandre.gramfort at inria.fr>; Discussion and
> support forum for the users of MNE Software <
> mne_analysis at nmr.mgh.harvard.edu>
> *Subject:* Re: [Mne_analysis] (no subject)
>
>
>
> *        External Email - Use Caution        *
>
> Hello
>
>
>
> Platform:      Windows-10-10.0.16299-SP0
>
> Python:        3.6.7 |Anaconda, Inc.| (default, Oct 28 2018, 19:44:12)
> [MSC v.1915 64 bit (AMD64)]
>
> Executable:    C:\Anaconda3\envs\mne\pythonw.exe
>
> CPU:           Intel64 Family 6 Model 78 Stepping 3, GenuineIntel: 4 cores
>
> Memory:        3.9 GB
>
>
>
> mne:           0.16.2
>
> numpy:         1.15.3 {blas=mkl_rt, lapack=mkl_rt}
>
> scipy:         1.1.0
>
> matplotlib:    3.0.1 {backend=module://ipykernel.pylab.backend_inline}
>
>
>
> sklearn:       0.20.0
>
> nibabel:       2.3.1
>
> mayavi:        4.6.2 {qt_api=pyqt5}
>
> pycuda:        Not found
>
> skcuda:        Not found
>
> pandas:        0.23.4
> ------------------------------
>
> *От:* mne_analysis-bounces at nmr.mgh.harvard.edu <
> mne_analysis-bounces at nmr.mgh.harvard.edu> от имени Alexandre Gramfort <
> alexandre.gramfort at inria.fr>
> *Отправлено:* 20 февраля 2019 г. 3:26
> *Кому:* Discussion and support forum for the users of MNE Software
> *Тема:* Re: [Mne_analysis] (no subject)
>
>
>
>         External Email - Use Caution
>
> hi,
>
> please say what mne.sys_info() reports.
>
> See:
>
> https://martinos.org/mne/dev/generated/mne.sys_info.html
>
> I suspect your version of matplotlib is too old or not properly installed.
>
> Alex
>
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