[Mne_analysis] Subcortical divide parcellation

[WANG Huifang]

        External Email - Use Caution        

Hi Alex,


Thank you so much for your leading me here.

In fact, based on your code, I managed to do it for the subcortical sub parcellation now. I am testing/verifying it, if it is correct, I would let you know or share with the community. 😊


Have a good day,

Best,

Huifang


________________________________
De : mne_analysis-bounces at nmr.mgh.harvard.edu <mne_analysis-bounces at nmr.mgh.harvard.edu> de la part de Alexandre Gramfort <alexandre.gramfort at inria.fr>
Envoyé : mercredi 9 janvier 2019 19:09:46
À : Discussion and support forum for the users of MNE Software
Objet : Re: [Mne_analysis] Subcortical divide parcellation

        External Email - Use Caution

hi Huifang,

there is no such tool in mne code but maybe someone can help.

Sorry I cannot help you more.

Alex

On Wed, Jan 9, 2019 at 11:26 AM Huifang Wang <huyfang.wang at univ-amu.fr> wrote:
>
>         External Email - Use Caution
>
> Dear mne experts,
>
>
> I would like to do subcortical divide parcellation, such as the hippocampus.
>
>
> By my understanding in freesurfer, the cortical parcellation can be saved as vertices but subcortical parcellation is only saved as volumes.
>
>
> I found your code mne.label.py is very useful for the cortical sub-parcellation. Thank you for your nice work.
>
> My question is: do you have any suggestion for the sub-cortical split, such as hippocampus?
>
>
> I am coding for it now. It would be great if you already have one tested.
>
>
> Thank you so much,
>
> Huifang
>
> _______________________________________________
> Mne_analysis mailing list
> Mne_analysis at nmr.mgh.harvard.edu
> https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis

_______________________________________________
Mne_analysis mailing list
Mne_analysis at nmr.mgh.harvard.edu
https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis
-------------- next part --------------
An HTML attachment was scrubbed...
URL: http://mail.nmr.mgh.harvard.edu/pipermail/mne_analysis/attachments/20190110/2641bb2f/attachment.html