[Mne_analysis] Little side packages

[amir Djalovski]

        External Email - Use Caution        

There is also the Eelbrain package (
https://eelbrain.readthedocs.io/en/stable/index.html).
Eelbrain is an easy to use python package which works with MNE and adds
some more statistics and plotting options.

Cheers,
Amir



On Sat, Jun 29, 2019 at 2:47 PM Alexandre Gramfort <
alexandre.gramfort at inria.fr> wrote:

>         External Email - Use Caution
>
> indeed we should list these on the main website.
>
> Let me advertise a few others here:
>
> https://pactools.github.io/ (for phase amplitude coupling estimation)
> https://autoreject.github.io/ (to automate the setting of reject
> parameter in Epochs and more)
> https://pierreablin.github.io/picard/ (for faster ICA estimation)
> https://alphacsc.github.io/ (to learn the waveform shapes of MEG/EEG
> signals using convolutional sparse coding)
>
> Tom Donoghue has also a nice list here :
> https://github.com/openlists/OpenTools/blob/master/README.md
>
> Alex
>
>
>
>
> On Fri, Jun 28, 2019 at 5:01 PM Eric Larson <larson.eric.d at gmail.com>
> wrote:
>
>>         External Email - Use Caution
>>
>> I'd be in favor of adding these to the docs somewhere. It would be useful
>> for people to have such links in one place.
>>
>> Eric
>>
>>
>> On Fri, Jun 28, 2019 at 10:24 AM Marijn van Vliet <w.m.vanvliet at gmail.com>
>> wrote:
>>
>>>         External Email - Use Caution
>>>
>>> Hi MNE users,
>>>
>>> sometimes I want to do some analysis that is not implemented in
>>> MNE-Python yet,
>>> leading to a collection of little side packages that do some specific
>>> thing.
>>> Maybe they are useful for someone else as well:
>>>
>>> Microstate analysis:
>>>         https://github.com/wmvanvliet/mne_microstates
>>>
>>> Representational similarity analysis (RSA):
>>>         https://github.com/wmvanvliet/rsa
>>>
>>>
>>> And somewhat larger packages to do bigger things:
>>>
>>> DICS spectral connectivity analysis:
>>>         https://github.com/aaltoimaginglanguage/conpy
>>>
>>> Post-hoc modification framework
>>>         https://github.com/wmvanvliet/posthoc
>>>
>>>
>>> Does anyone else have packages to share?
>>>
>>> best,
>>> Marijn.
>>>
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