[Mne_analysis] Loading the montage on mne-python

[Francesco Mattioli]

        External Email - Use Caution        

Thank you for your patience. In this code a layout is loaded i, on the
other hand, have to load a montage.
If I go to the third link you sent in the first email, the syntax used is
this one:

eegbci.standardize(raw)  # set channel names
montage = make_standard_montage('standard_1020')
raw.set_montage(montage)

The output is:

File "<ipython-input-14-90c82492d6c4>", line 4, in <module>
    eegbci.standardize(raw)  # set channel names
AttributeError: module 'mne.datasets.eegbci' has no attribute 'standardize'

Do you have any suggestion?

Francesco Mattioli

I'm trying to work without distractions. If I do not respond immediately,
drink a cup of tea and be patient. Great ideas need deep work!

ᐧ

Il giorno sab 21 mar 2020 alle ore 13:51 Alexandre Gramfort <
alexandre.gramfort at inria.fr> ha scritto:

>         External Email - Use Caution
>
> hi,
>
> I gave you 2 links. The first one:
>
> https://mne.tools/stable/auto_examples/decoding/plot_
> decoding_csp_eeg.html#sphx-glr-auto-examples-decoding-
> plot-decoding-csp-eeg-py
>
> uses the stable 0.19.2 code.
>
> Alex
>
>
> On Sat, Mar 21, 2020 at 12:16 PM Francesco Mattioli <
> francesco.mttl at gmail.com> wrote:
>
>>         External Email - Use Caution
>>
>> Thank you for your help. The code you suggested is from another version
>> of mne-python (0.20.dev0), I'm using 0.19.2. Do you suggest to upgrade the
>> library to version 0.20.dev0?
>> Regards,
>> Francesco Mattioli
>>
>> I'm trying to work without distractions. If I do not respond immediately,
>> drink a cup of tea and be patient. Great ideas need deep work!
>>
>> ᐧ
>>
>> Il giorno gio 19 mar 2020 alle ore 11:55 Andrade Rey René <
>> rene.andrade at edu.uah.es> ha scritto:
>>
>>>         External Email - Use Caution
>>>
>>> I think he will have the same problem as me with sfp for montage.
>>>
>>> Sent from my iPhone
>>>
>>> On 19 Mar 2020, at 09:50, Alexandre Gramfort <
>>> alexandre.gramfort at inria.fr> wrote:
>>>
>>> 
>>>
>>>         External Email - Use Caution
>>>
>>> hi,
>>>
>>> if you go this page at the bottom you'll see all examples that use this
>>> dataset:
>>>
>>> https://mne.tools/stable/generated/mne.datasets.eegbci.load_data.html
>>>
>>> you'll see that one example makes topographies.
>>>
>>>
>>> https://mne.tools/stable/auto_examples/decoding/plot_decoding_csp_eeg.html#sphx-glr-auto-examples-decoding-plot-decoding-csp-eeg-py
>>>
>>> at the bottom you'll see it uses a layout. Now if you switch to current
>>> code
>>> version it will use set_montage.
>>>
>>>
>>> https://mne.tools/dev/auto_examples/decoding/plot_decoding_csp_eeg.html#sphx-glr-auto-examples-decoding-plot-decoding-csp-eeg-py
>>>
>>> HTH
>>> Alex
>>>
>>>
>>> On Thu, Mar 19, 2020 at 9:37 AM Francesco Mattioli <
>>> francesco.mttl at gmail.com> wrote:
>>>
>>>>         External Email - Use Caution
>>>>
>>>> Hi, I'm running some tests with the EEGBCI
>>>> <https://physionet.org/content/eegmmidb/1.0.0/> dataset
>>>> <https://physionet.org/content/eegmmidb/1.0.0/>, the database format
>>>> is EDF and I'm using version 0.19.2 of mne-python.
>>>>
>>>> I'm trying to make an ICA, the problem is that when I call the method:
>>>> ica.plot_properties(raw, picks=[0, 1])
>>>>
>>>> I get this error back in the console:
>>>> WARNING:root:Did not find any electrode locations (in the info object),
>>>> will attempt to use digitization points instead. However, if digitization
>>>> points do not correspond to the EEG electrodes, this will lead to bad
>>>> results. Please verify that the sensor locations in the plot are accurate.
>>>>
>>>> I probably have to load the montage. How do I do that? I tried to look
>>>> carefully at the documentation but I didn't reach a conclusion. Could
>>>> someone help me?
>>>> Thank you for your support,
>>>>
>>>> Francesco Mattioli
>>>>
>>>> I'm trying to work without distractions. If I do not respond
>>>> immediately, drink a cup of tea and be patient. Great ideas need deep work!
>>>> ᐧ
>>>> _______________________________________________
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