[Mne_analysis] 4D neuroimaging data?

Eric Larson larson.eric.d at gmail.com
Sat May 21 09:33:32 EDT 2022
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This should be fixed in `main` soon by
https://secure-web.cisco.com/1zY7DU4o4ECNVwd950pEhd4zrNrAAYN2o5h2J3Mi2hXC43dNqg5sBVI0jCwFXlKuOl265mwraQ61wQ76NAmhzwIyBeGEVqRYZDA3vgUwaHKhnuUqFLV6Tj0WY3KND6Bb5FCYP9yqwf0N1nltVsAjtjLDS4sIUFEvLYAROB0pOJYHMcDkk9p-jyncxo-sBeDAh_bU8hfRAGEB4muuEc8VjpCmyXUxpmP8RKFR_ShZ1_863a-e81IX7yn8J0s_MHADQvyCQOy9Kw6SHERIM3zrC2lxzvjhAZ4jphxmm-g-0Iv3aS-qEpc88vY23Jj3e5STTOwhbx30EftCFFX1-lQYdcw/https%3A%2F%2Fgithub.com%2Fmne-tools%2Fmne-python%2Fpull%2F10662

Eric


On Fri, May 20, 2022 at 4:34 AM Brunner, Clemens (
clemens.brunner at uni-graz.at) <clemens.brunner at uni-graz.at> wrote:

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> Hi!
>
> Would you mind posting your question at
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> Thanks,
> Clemens
>
>
> > On 20.05.2022, at 08:52, Karin Westin <karin.westin85 at gmail.com> wrote:
> >
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> >
> > Hi thank you for your answer.
> >
> > I'd not think I have permission to share the data. However, I commented
> out the error in mne.io.meas_info line 1100-1103:
> >
> >             #if not (isinstance(loc, np.ndarray) and loc.shape == (12,)):
> >              #   raise TypeError(
> >               #      'Bad info: info["chs"][%d]["loc"] must be ndarray
> with '
> >                #     '12 elements, got %r' % (ci, loc))
> >
> > Then I could actually create an info object. Going through
> info['chs'][i][loc] for all unused EEG channels I found that loc was set to
> None.  I manually set the location to [[0,0,1],[0,0,1],[0,0,1]] and now I
> can open and read the data!
> >
> > Thank you for your help,
> > Karin
> >
> >
> > Den tors 19 maj 2022 kl 16:37 skrev Alexandre Gramfort <
> alexandre.gramfort at inria.fr>:
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> >
> >
> > we need to make the reader robust to files where the EEG has not been
> digitized and no channel location
> > is available.
> >
> > can you share maybe a file with me?
> >
> > Alex
> >
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