[Mne_analysis] Cluster-based permutation test with correlation
Xia Tao
psytao18 at connect.hku.hk
Mon Feb 6 06:00:05 EST 2023
External Email - Use Caution
Dear MNE users,
I am trying to explore the relationship between my behavioral outcome and sigma power at all time points. I attempted to conduct a permutation cluster test using Pearson correlation as my statistic, but I encountered an error: TypeError: No loop matching the specified signature and casting was found for ufunc add.
If anyone has encountered this issue and knows how to resolve it, I would greatly appreciate your help.
Here is the code and error in detail:
def statistic(x, y):
return pearsonr(x, y).statistic
c_obs, clusters_c, cluster_p_values, H0 = \
permutation_cluster_test([sigma,behavioral],tail=0,threshold=0.05,stat_fun=statistic,n_jobs=-1,n_permutations=1000)#competition vs noncompetition
error:
[cid:c4c57b94-82d8-45b9-b310-e92df4421778]
Thank you,
Tao
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