<html xmlns:v="urn:schemas-microsoft-com:vml" xmlns:o="urn:schemas-microsoft-com:office:office" xmlns:w="urn:schemas-microsoft-com:office:word" xmlns:m="http://schemas.microsoft.com/office/2004/12/omml" xmlns="http://www.w3.org/TR/REC-html40"><head><META HTTP-EQUIV="Content-Type" CONTENT="text/html; charset=us-ascii"><meta name=Generator content="Microsoft Word 14 (filtered medium)"><style><!--
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</o:shapelayout></xml><![endif]--></head><body lang=EN-GB link=blue vlink=purple><div class=WordSection1><p class=MsoNormal>Hello MNE experts,<o:p></o:p></p><p class=MsoNormal>I have a question for creating a Label from a functional STC file<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>I found the script plot_label_from_stc.py which is great!<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>However when I use the function mne.stc_to_label I am running into a problem <o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>My STC file is an average and morph file and I read it via the command mne_read_source_estimate. <o:p></o:p></p><p class=MsoNormal>I don’t have the source space and I am forced to save the label as unconnected vertices.<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>I try to reconnect the vertices in FreeSurfer but with no success so far..<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Is there a way to overpass this problem in a way I can save my label as a connected surface?<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Thanks in advance<o:p></o:p></p><p class=MsoNormal>Elisabeth<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>__________________________________________________________<o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Dr Elisabeth Fonteneau<o:p></o:p></p><p class=MsoNormal>Department of Psychology<o:p></o:p></p><p class=MsoNormal>University of Cambridge<o:p></o:p></p><p class=MsoNormal>Downing Street, Cambridge CB2 3EB, UK<o:p></o:p></p><p class=MsoNormal>Email: <a href="mailto:ef309@cam.ac.uk"><span style='color:blue'>ef309@cam.ac.uk</span></a><o:p></o:p></p><p class=MsoNormal>Web: <a href="http://www.neurolex.psychol.cam.ac.uk/directory/ef309@cam.ac.uk"><span style='color:blue'>www.neurolex.psychol.cam.ac.uk/directory/ef309@cam.ac.uk</span></a><o:p></o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal><o:p> </o:p></p></div></body></html>