<div dir="ltr">hi <span style="font-size:12.8px">Talitha,</span><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">does your mayavi setup works otherwise? can you do stc.plot with the output of dSPM/MNE apply_inverse?</span></div><div><span style="font-size:12.8px">In other words is it a mayavi/vtk problem or an mne/pysurfer problem?</span></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">Alex</span></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Tue, Jun 6, 2017 at 2:54 AM, Talitha Ford <span dir="ltr"><<a href="mailto:tcford@swin.edu.au" target="_blank">tcford@swin.edu.au</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
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<p class="MsoNormal"><span lang="EN-AU">Dear list,<u></u><u></u></span></p>
<p class="MsoNormal"><span lang="EN-AU"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-AU">I am attempting to run the </span>‘2 samples permutation test on source data with spatio-temporal clustering’ tutorial (<a href="https://martinos.org/mne/stable/auto_tutorials/plot_stats_cluster_spatio_temporal_2samp.html" target="_blank">https://martinos.org/mne/<wbr>stable/auto_tutorials/plot_<wbr>stats_cluster_spatio_temporal_<wbr>2samp.html</a>), but
when I get to visualising the SourceEstimate object, a <span lang="EN-AU">TVTK window opens and freezes; no image appears and I am unable to close the window without terminating the iPython session. Also, stc.resample(50) throws an error ‘</span>ImportError:
cannot import name sigtools’<u></u><u></u></p>
<p class="MsoNormal"><span lang="EN-AU"><u></u> <u></u></span></p>
<p class="MsoNormal"><span lang="EN-AU">I am running iPython version 2.7 from the Anaconda distribution, and have up-to-date mne, scipy, PySurfer,
</span>matplotlib, scikit-learn and mayavi packages. I am running the analysis on an iMac OS Sierra 10.12.5.<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal">Can someone please point me in the right direction to overcome this?<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal">Thank you,<u></u><u></u></p>
<p class="MsoNormal">Talitha<u></u><u></u></p>
<p class="MsoNormal"><u></u> <u></u></p>
<p class="MsoNormal"><span lang="EN-AU"><u></u> <u></u></span></p>
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