<div dir="ltr">hi,<br><br>just replace<br><br>data = raw.get_data()<br><br>by<br><br>data = raw[:, :][0]<div><br></div><div>the get_data method will appear in the next release.<br><br>Alex<br></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Sat, Jul 8, 2017 at 2:14 AM, Senaka Amarakeerthi <span dir="ltr"><<a href="mailto:senakahks@gmail.com" target="_blank">senakahks@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><img width="0" height="0" class="m_7946768480224843511mailtrack-img" alt="" src="https://mailtrack.io/trace/mail/3482fd3570b968212e2a5d9d298019d3a8f77638.png?u=648108">Dear Jaakko,<div><br></div><div>Thank you for quick reply. I tried your code and it complains telling that 'Raw' object has no attribute 'get_data'.</div><div><br></div><div><br></div><div>Here is the full report of error</div><div><br></div><div><div>Opening raw data file /Users/Senaka/to_share-raw.<wbr>fif...</div><div>Isotrak not found</div><div> Range : 0 ... 55935 = 0.000 ... 436.992 secs</div><div>Ready.</div><div>Adding average EEG reference projection.</div><div>1 projection items deactivated</div><div>Reading 0 ... 55935 = 0.000 ... 436.992 secs...</div><div>Traceback (most recent call last):</div><div> File "/Users/Senaka//test.py", line 3, in <module></div><div> data = raw.get_data()</div><div>AttributeError: 'Raw' object has no attribute 'get_data'</div><div><br></div><div><br><div>Thanks and regards,</div><span class=""><div><br></div><div>Senaka<br><br><br><br><div style="display:inline">
<div class="m_7946768480224843511mt-signature" style="padding-right:5px;color:initial">
<a href="https://mailtrack.io/" class="m_7946768480224843511mt-signature-logo" style="text-decoration:none" target="_blank"> <img src="https://s3-eu-west-1.amazonaws.com/mailtrack-crx/icon-signature.png" height="14"> </a> <span style="color:rgb(153,153,153)">Sent with </span> <a href="https://mailtrack.io/install?source=signature&lang=en&referral=senakahks@gmail.com&idSignature=22" class="m_7946768480224843511mt-install" target="_blank">Mailtrack</a>
</div></div></div></span></div></div><div><div class="h5"><div class="gmail_extra"><br><div class="gmail_quote">On Fri, Jul 7, 2017 at 7:49 PM, Jaakko Leppakangas <span dir="ltr"><<a href="mailto:jaeilepp@gmail.com" target="_blank">jaeilepp@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr">Hi,<div>it seems that the stim channel is assigned as EEG for some reason (probably a mistake in the acquisition). Also the values on the stim channel are micro scale causing the event finding to fail. Here's a short script for fixing raw object.</div><div><br></div><div><pre style="color:rgb(0,0,0);font-family:'DejaVu Sans Mono';font-size:9pt"><span style="color:rgb(0,0,128);font-weight:bold">import </span>mne<br>raw = mne.io.read_raw_fif(<span style="color:rgb(0,128,0);font-weight:bold">'to_share-<wbr>raw.fif'</span>, <span style="color:rgb(102,0,153)">preload</span>=<span style="color:rgb(0,0,128)">True</span>)<br>data = raw.get_data()<br>data[<span style="color:rgb(0,0,255)">14</span>] *= <span style="color:rgb(0,0,255)">1000000<br></span>raw = mne.io.RawArray(data, <a href="http://raw.info" target="_blank">raw.info</a>)<br>raw.set_channel_types({<span style="color:rgb(0,128,0);font-weight:bold">'STI 014'</span>: <span style="color:rgb(0,128,0);font-weight:bold">'stim'</span>})</pre><span class="m_7946768480224843511HOEnZb"><font color="#888888"><pre style="color:rgb(0,0,0);font-family:'DejaVu Sans Mono';font-size:9pt"><span style="color:rgb(34,34,34);font-family:arial,sans-serif;font-size:small;white-space:normal">-Jaakko</span><br></pre></font></span></div></div><div class="m_7946768480224843511HOEnZb"><div class="m_7946768480224843511h5"><div class="gmail_extra"><br><div class="gmail_quote">On Fri, Jul 7, 2017 at 3:50 PM, Senaka Amarakeerthi <span dir="ltr"><<a href="mailto:senakahks@gmail.com" target="_blank">senakahks@gmail.com</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex"><div dir="ltr"><img width="0" height="0" class="m_7946768480224843511mailtrack-img" alt="">Dear Alex,<div><br></div><div>Please find the <span style="font-size:12.8px">to_share-raw.fif file by accessing following link.</span></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px"><a href="https://www.dropbox.com/s/58ji93q7xj6nett/to_share-raw.fif?dl=0" target="_blank">https://www.dropbox.com/s/58ji<wbr>93q7xj6nett/to_share-raw.fif?d<wbr>l=0</a></span><br></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">Best regards,</span></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px">Senaka</span></div><div><span style="font-size:12.8px"><br></span></div><div><span style="font-size:12.8px"><br></span><br><br><br><div style="display:inline">
<div class="m_7946768480224843511mt-signature" style="padding-right:5px;color:initial">
<a href="https://mailtrack.io/" class="m_7946768480224843511mt-signature-logo" style="text-decoration:none" target="_blank"> <img src="https://s3-eu-west-1.amazonaws.com/mailtrack-crx/icon-signature.png" height="14"> </a> <span style="color:rgb(153,153,153)">Sent with </span> <a href="https://mailtrack.io/install?source=signature&lang=en&referral=senakahks@gmail.com&idSignature=22" class="m_7946768480224843511mt-install" target="_blank">Mailtrack</a>
</div></div></div><div class="gmail_extra"><br><div class="gmail_quote"><div><div class="m_7946768480224843511m_-1244353501744523674h5">On Fri, Jul 7, 2017 at 12:10 PM, Alexandre Gramfort <span dir="ltr"><<a href="mailto:alexandre.gramfort@telecom-paristech.fr" target="_blank">alexandre.gramfort@telecom-pa<wbr>ristech.fr</a>></span> wrote:<br></div></div><blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left:1px solid rgb(204,204,204);padding-left:1ex"><div><div class="m_7946768480224843511m_-1244353501744523674h5"><div dir="ltr">that's indeed unexpected.<div><br></div><div>can you share the file?</div><div><br></div><div>data.save('to_share-raw.fif')</div><div><br></div><div>thx</div><div>Alex</div></div>
<br></div></div>______________________________<wbr>_________________<br>
Mne_analysis mailing list<br>
<a href="mailto:Mne_analysis@nmr.mgh.harvard.edu" target="_blank">Mne_analysis@nmr.mgh.harvard.e<wbr>du</a><br>
<a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" rel="noreferrer" target="_blank">https://mail.nmr.mgh.harvard.e<wbr>du/mailman/listinfo/mne_analys<wbr>is</a><br>
<br>
<br>
The information in this e-mail is intended only for the person to whom it is<br>
addressed. If you believe this e-mail was sent to you in error and the e-mail<br>
contains patient information, please contact the Partners Compliance HelpLine at<br>
<a href="http://www.partners.org/complianceline" rel="noreferrer" target="_blank">http://www.partners.org/compli<wbr>anceline</a> . If the e-mail was sent to you in error<br>
but does not contain patient information, please contact the sender and properly<br>
dispose of the e-mail.<br>
<br></blockquote></div><br><br clear="all"><div><br></div>
</div></div>
<br>______________________________<wbr>_________________<br>
Mne_analysis mailing list<br>
<a href="mailto:Mne_analysis@nmr.mgh.harvard.edu" target="_blank">Mne_analysis@nmr.mgh.harvard.e<wbr>du</a><br>
<a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" rel="noreferrer" target="_blank">https://mail.nmr.mgh.harvard.e<wbr>du/mailman/listinfo/mne_analys<wbr>is</a><br>
<br>
<br>
The information in this e-mail is intended only for the person to whom it is<br>
addressed. If you believe this e-mail was sent to you in error and the e-mail<br>
contains patient information, please contact the Partners Compliance HelpLine at<br>
<a href="http://www.partners.org/complianceline" rel="noreferrer" target="_blank">http://www.partners.org/compli<wbr>anceline</a> . If the e-mail was sent to you in error<br>
but does not contain patient information, please contact the sender and properly<br>
dispose of the e-mail.<br>
<br></blockquote></div><br></div>
</div></div><br>______________________________<wbr>_________________<br>
Mne_analysis mailing list<br>
<a href="mailto:Mne_analysis@nmr.mgh.harvard.edu" target="_blank">Mne_analysis@nmr.mgh.harvard.e<wbr>du</a><br>
<a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" rel="noreferrer" target="_blank">https://mail.nmr.mgh.harvard.e<wbr>du/mailman/listinfo/mne_analys<wbr>is</a><br>
<br>
<br>
The information in this e-mail is intended only for the person to whom it is<br>
addressed. If you believe this e-mail was sent to you in error and the e-mail<br>
contains patient information, please contact the Partners Compliance HelpLine at<br>
<a href="http://www.partners.org/complianceline" rel="noreferrer" target="_blank">http://www.partners.org/compli<wbr>anceline</a> . If the e-mail was sent to you in error<br>
but does not contain patient information, please contact the sender and properly<br>
dispose of the e-mail.<br>
<br></blockquote></div><br><br clear="all"><div><br></div><br>
</div></div></div></div>
<br>______________________________<wbr>_________________<br>
Mne_analysis mailing list<br>
<a href="mailto:Mne_analysis@nmr.mgh.harvard.edu">Mne_analysis@nmr.mgh.harvard.<wbr>edu</a><br>
<a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" rel="noreferrer" target="_blank">https://mail.nmr.mgh.harvard.<wbr>edu/mailman/listinfo/mne_<wbr>analysis</a><br>
<br>
<br>
The information in this e-mail is intended only for the person to whom it is<br>
addressed. If you believe this e-mail was sent to you in error and the e-mail<br>
contains patient information, please contact the Partners Compliance HelpLine at<br>
<a href="http://www.partners.org/complianceline" rel="noreferrer" target="_blank">http://www.partners.org/<wbr>complianceline</a> . If the e-mail was sent to you in error<br>
but does not contain patient information, please contact the sender and properly<br>
dispose of the e-mail.<br>
<br></blockquote></div><br></div>