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--></style></head><body lang=ZH-CN link=blue vlink="#954F72"><div class=WordSection1><p class=MsoNormal><span lang=EN-US>Sorry for late reply! </span></p><p class=MsoNormal><span lang=EN-US>I’ve tried the example, and saw the figure, so my mayavi works</span></p><p class=MsoNormal><span lang=EN-US>I’m still in this trouble </span><span lang=EN-US style='font-family:"Segoe UI Emoji",sans-serif'>☹</span></p><p class=MsoNormal><span lang=EN-US>Are there any other possible errors that can not see the figure?</span></p><p class=MsoNormal><span lang=EN-US style='font-size:12.0pt;font-family:SimSun'><o:p> </o:p></span></p><div style='mso-element:para-border-div;border:none;border-top:solid #E1E1E1 1.0pt;padding:3.0pt 0cm 0cm 0cm'><p class=MsoNormal style='border:none;padding:0cm'><b>发件人<span lang=EN-US>: </span></b><span lang=EN-US><a href="mailto:alexandre.gramfort@inria.fr">Alexandre Gramfort</a><br></span><b>发送时间<span lang=EN-US>: </span></b><span lang=EN-US>2017</span>年<span lang=EN-US>8</span>月<span lang=EN-US>31</span>日<span lang=EN-US> 4:17<br></span><b>收件人<span lang=EN-US>: </span></b><span lang=EN-US><a href="mailto:mne_analysis@nmr.mgh.harvard.edu">Discussion and support forum for the users of MNE Software</a><br></span><b>主题<span lang=EN-US>: </span></b><span lang=EN-US>Re: [Mne_analysis] a problem of figure</span></p></div><p class=MsoNormal><span lang=EN-US style='font-size:12.0pt;font-family:SimSun'><o:p> </o:p></span></p><div><p class=MsoNormal align=left style='text-align:left'><span lang=EN-US>hi </span><span lang=EN-US style='font-size:9.5pt'>Yanzhu,</span><span lang=EN-US style='font-size:12.0pt'><o:p></o:p></span></p><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US style='font-size:9.5pt'>do you see any error message?</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US style='font-size:9.5pt'>can you check that mayavi works but typing for example:</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US style='font-size:9.5pt'>from mayavi import mlab</span></p></div><div><p class=MsoNormal><span lang=EN-US>mlab.test_contour3d()</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>it's possible the figure is opened in the back, behind the current window.</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>HTH</span></p></div><div><p class=MsoNormal><span lang=EN-US>Alex</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US> </span></p></div></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p><div><p class=MsoNormal><span lang=EN-US>On Wed, Aug 30, 2017 at 5:26 AM, Yvonne Li <<a href="mailto:yl88@nyu.edu" target="_blank">yl88@nyu.edu</a>> wrote:</span></p><blockquote style='border:none;border-left:solid #CCCCCC 1.0pt;padding:0cm 0cm 0cm 6.0pt;margin-left:4.8pt;margin-right:0cm'><div><p class=MsoNormal><span lang=EN-US><br clear=all></span></p><div><p class=MsoNormal><span lang=EN-US>Dear list,</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>I tried to run the example "source localization with MNE/dSPM/sLORETA"</span></p></div><div><p class=MsoNormal><span lang=EN-US>After running the following command.</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>"""</span></p></div><div><div><p class=MsoNormal><span lang=EN-US>vertno_max, time_max = stc.get_peak(hemi='rh')</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>subjects_dir = data_path + '/subjects'</span></p></div><div><p class=MsoNormal><span lang=EN-US>brain = stc.plot(surface='inflated', hemi='rh', subjects_dir=subjects_dir,</span></p></div><div><p class=MsoNormal><span lang=EN-US> clim=dict(kind='value', lims=[8, 12, 15]),</span></p></div><div><p class=MsoNormal><span lang=EN-US> initial_time=time_max, time_unit='s')</span></p></div><div><p class=MsoNormal><span lang=EN-US>brain.add_foci(vertno_max, coords_as_verts=True, hemi='rh', color='blue',</span></p></div><div><p class=MsoNormal><span lang=EN-US> scale_factor=0.6)</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>brain.show_view('lateral')</span></p></div></div><div><p class=MsoNormal><span lang=EN-US>"""</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>It showed following ouputs in the console:</span></p></div><div><p class=MsoNormal><span lang=EN-US>"Updating smoothing matrix, be patient..</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 1</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 2</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 3</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 4</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 5</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 6</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 7</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 8</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 9</span></p></div><div><p class=MsoNormal><span lang=EN-US>Smoothing matrix creation, step 10</span></p></div><div><p class=MsoNormal><span lang=EN-US>colormap: fmin=8.00e+00 fmid=1.20e+01 fmax=1.50e+01 transparent=1"</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>It supposed to show a graph of brain bilaterally, however, It doesn't show any graph. I wonder what is the problem. could you guys help with that?</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>ps. my python version is 2.7</span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US>Yanzhu Li</span></p></div><p class=MsoNormal><span lang=EN-US>-- </span></p><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p></div><div><div><div><p><i><span lang=EN-US style='font-size:10.0pt;font-family:"Arial",sans-serif;color:#674EA7'><img border=0 width=96 height=96 style='width:1.0in;height:1.0in' id="_x0000_i1025" src="https://docs.google.com/uc?export=download&id=0B5glwlbypjqDZDI2bU5sRERJMlU&revid=0B5glwlbypjqDSVl3NVdlb00rbVpaU3RXSWxPMFpoZ0xqZlR3PQ" alt="https://docs.google.com/uc?export=download&id=0B5glwlbypjqDZDI2bU5sRERJMlU&revid=0B5glwlbypjqDSVl3NVdlb00rbVpaU3RXSWxPMFpoZ0xqZlR3PQ"></span></i></p><p><i><span lang=EN-US style='font-size:10.0pt;font-family:"Arial",sans-serif;color:#674EA7'>Yanzhu Li </span></i></p><p><span lang=EN-US style='font-size:9.5pt;font-family:"Arial",sans-serif;color:#674EA7'>NYU-ECNU Institute of Brain and Cognitive Science <br>3663 ZhongShan Road North, Geo Building, RM 161</span></p><p><span lang=EN-US style='font-size:9.5pt;font-family:"Arial",sans-serif;color:#674EA7'>Shanghai, 200062 China<br>Mobile: <a href="tel:+86%20130%201186%202600" target="_blank">+86 130-1186-2600</a></span></p><p><span lang=EN-US style='font-size:10.0pt;font-family:"Arial",sans-serif;color:#674EA7'>Tel</span><span style='font-size:10.0pt;color:#674EA7'>：</span><u><span lang=EN-US style='font-size:10.0pt;font-family:"Arial",sans-serif;color:#674EA7'>(86 21)2059-5995</span></u></p><p><span lang=EN-US style='font-size:10.0pt;font-family:"Arial",sans-serif;color:#674EA7'>Email</span><span style='font-size:10.0pt;color:#674EA7'>：<span lang=EN-US><a href="mailto:yl88@nyu.edu" target="_blank">yl88@nyu.edu</a></span></span></p><p><span lang=EN-US style='font-size:9.5pt;font-family:"Arial",sans-serif;color:#674EA7'>Website</span><span style='font-size:9.5pt;color:#674EA7'>：<span lang=EN-US><a href="http://slang.science" target="_blank">slang.science</a></span></span></p></div></div></div></div></div><p class=MsoNormal style='margin-bottom:12.0pt'><span lang=EN-US><br>_______________________________________________<br>Mne_analysis mailing list<br><a href="mailto:Mne_analysis@nmr.mgh.harvard.edu">Mne_analysis@nmr.mgh.harvard.edu</a><br><a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" target="_blank">https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis</a><br><br><br>The information in this e-mail is intended only for the person to whom it is<br>addressed. If you believe this e-mail was sent to you in error and the e-mail<br>contains patient information, please contact the Partners Compliance HelpLine at<br><a href="http://www.partners.org/complianceline" target="_blank">http://www.partners.org/complianceline</a> . If the e-mail was sent to you in error<br>but does not contain patient information, please contact the sender and properly<br>dispose of the e-mail.</span></p></blockquote></div></div><p class=MsoNormal><span lang=EN-US><o:p> </o:p></span></p><p class=MsoNormal><span lang=EN-US style='font-size:12.0pt;font-family:SimSun'><o:p> </o:p></span></p></div></body></html>