<div dir="ltr">In the meantime, the code necessary to put a surface source estimate into a NIfTI volume is in a work-in-progress pull request here:<div><br></div><div><a href="https://github.com/mne-tools/mne-python/pull/4496/files#diff-c38906291c7d4fa5e1df2d494b9c27d2R129">https://github.com/mne-tools/mne-python/pull/4496/files#diff-c38906291c7d4fa5e1df2d494b9c27d2R129</a><br></div><div><br></div><div>Eric</div><div><br></div></div><div class="gmail_extra"><br><div class="gmail_quote">On Thu, Dec 14, 2017 at 7:40 AM, Alexandre Gramfort <span dir="ltr"><<a href="mailto:alexandre.gramfort@inria.fr" target="_blank">alexandre.gramfort@inria.fr</a>></span> wrote:<br><blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Dear Lori,<br>
<br>
presently in MNE there is no function to export a surface activation<br>
to a volume.<br>
<br>
mri_surf2vol in freesurfer would be my approach but it would need<br>
the high resolution activation as input.<br>
<br>
please open an issue at : <a href="https://github.com/mne-tools/mne-python/issues" rel="noreferrer" target="_blank">https://github.com/mne-tools/<wbr>mne-python/issues</a><br>
<br>
so you know when we implement this.<br>
<br>
Best,<br>
Alex<br>
<div><div class="h5"><br>
On Wed, Dec 13, 2017 at 11:02 PM, Lori Sanfratello <<a href="mailto:lsanfratello@mrn.org">lsanfratello@mrn.org</a>> wrote:<br>
> Hello, can't find a way to do this. Found an old thread that talks about<br>
> "updated MixedSourceEstimate.export_<wbr>volumes_to_nifti to include an option to<br>
> export the surface activations as well" at<br>
> <a href="https://github.com/mne-tools/mne-python/pull/1462" rel="noreferrer" target="_blank">https://github.com/mne-tools/<wbr>mne-python/pull/1462</a> . However, I can't find<br>
> documentation on using it, and it doesn't work if I try to use it<br>
> (AttributeError: 'MixedSourceEstimate' object has no attribute<br>
> 'export_volumes_to_nifti'). Any help would be appreciated. Thanks, Lori<br>
><br>
> --<br>
> Dr. L. Sanfratello, PhD<br>
> Assistant Professor of Trans. Neuroscience<br>
> The Mind Research Network,<br>
> 1101 Yale Blvd NE<br>
> Albuquerque, NM 87106<br>
> <a href="tel:505%20272-5557" value="+15052725557">505 272-5557</a><br>
><br>
</div></div>> ______________________________<wbr>_________________<br>
> Mne_analysis mailing list<br>
> <a href="mailto:Mne_analysis@nmr.mgh.harvard.edu">Mne_analysis@nmr.mgh.harvard.<wbr>edu</a><br>
> <a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" rel="noreferrer" target="_blank">https://mail.nmr.mgh.harvard.<wbr>edu/mailman/listinfo/mne_<wbr>analysis</a><br>
><br>
><br>
> The information in this e-mail is intended only for the person to whom it is<br>
> addressed. If you believe this e-mail was sent to you in error and the<br>
> e-mail<br>
> contains patient information, please contact the Partners Compliance<br>
> HelpLine at<br>
> <a href="http://www.partners.org/complianceline" rel="noreferrer" target="_blank">http://www.partners.org/<wbr>complianceline</a> . If the e-mail was sent to you in<br>
> error<br>
> but does not contain patient information, please contact the sender and<br>
> properly<br>
> dispose of the e-mail.<br>
><br>
______________________________<wbr>_________________<br>
Mne_analysis mailing list<br>
<a href="mailto:Mne_analysis@nmr.mgh.harvard.edu">Mne_analysis@nmr.mgh.harvard.<wbr>edu</a><br>
<a href="https://mail.nmr.mgh.harvard.edu/mailman/listinfo/mne_analysis" rel="noreferrer" target="_blank">https://mail.nmr.mgh.harvard.<wbr>edu/mailman/listinfo/mne_<wbr>analysis</a><br>
</blockquote></div><br></div>