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<p class="MsoNormal">Hi all,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Using the ECOG tutorial (<a href="https://martinos.org/mne/stable/auto_examples/visualization/plot_3d_to_2d.html">https://martinos.org/mne/stable/auto_examples/visualization/plot_3d_to_2d.html</a>) as a starting point, I’m trying to import
some SEEG data. I can get the EEG data loaded and create a DigMontage, but I am unable to view/confirm electrode location. Viz.plot_alignment does not seem to work with SEEG data. Am I missing something?<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">As an alternative, I tried a kludge with PySurfer.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">>> from surfer import Brain<o:p></o:p></p>
<p class="MsoNormal">>> %gui qt<o:p></o:p></p>
<p class="MsoNormal">>><o:p> </o:p></p>
<p class="MsoNormal">>> brain = Brain(subject_id, "lh", "pial", subjects_dir=subjects_dir, cortex='ivory', alpha=0.6)<o:p></o:p></p>
<p class="MsoNormal">>> coords = [[seeg.x[i], seeg.y[i], seeg.z[i]] for i in range(len(seeg))]<o:p></o:p></p>
<p class="MsoNormal">>> brain.add_foci(coords, color='red', scale_factor=0.2)<o:p></o:p></p>
<p class="MsoNormal">>> brain.show_view('lateral')<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">If this results in positions that look correct, does that imply that the electrode positions are probably correct?<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">Thanks for your help.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:black">Larry<br>
<br>
</span><span style="font-size:12.0pt;font-family:"Times New Roman","serif""><o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
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